LOCUS BC132917 3761 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens zinc finger protein 248, mRNA (cDNA clone MGC:164548
IMAGE:40146939), complete cds.
ACCESSION BC132917
VERSION BC132917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3761)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3761)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: K Column: 11.
FEATURES Location/Qualifiers
source 1..3761
/db_xref="H-InvDB:HIT000390968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164548 IMAGE:40146939"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCGCACTC"
gene 1..3761
/gene="ZNF248"
/gene_synonym="bA162G10.3"
/db_xref="GeneID:57209"
/db_xref="HGNC:HGNC:13041"
CDS 236..1975
/gene="ZNF248"
/gene_synonym="bA162G10.3"
/codon_start=1
/product="zinc finger protein 248"
/protein_id="AAI32918.1"
/db_xref="GeneID:57209"
/db_xref="HGNC:HGNC:13041"
/translation="MNKSQEQVSFKDVCVDFTQEEWYLLDPAQKILYRDVILENYSNL
VSVGYCITKPEVIFKIEQGEEPWILEKGFPSQCHPERKWKVDDVLESSQENEDDHFWE
LLFHNNKTVSVENGDRGSKTFNLGTDPVSLRNYPYKICDSCEMNLKNISGLIISKKNC
SRKKPDEFNVCEKLLLDIRHEKIPIGEKSYKYDQKRNAINYHQDLSQPSFGQSFEYSK
NGQGFHDEAAFFTNKRSQIGETVCKYNECGRTFIESLKLNISQRPHLEMEPYGCSICG
KSFCMNLRFGHQRALTKDNPYEYNEYGEIFCDNSAFIIHQGAYTRKILREYKVSDKTW
EKSALLKHQIVHMGGKSYDYNENGSNFSKKSHLTQLRRAHTGEKTFECGECGKTFWEK
SNLTQHQRTHTGEKPYECTECGKAFCQKPHLTNHQRTHTGEKPYECKQCGKTFCVKSN
LTEHQRTHTGEKPYECNACGKSFCHRSALTVHQRTHTGEKPFICNECGKSFCVKSNLI
VHQRTHTGEKPYKCNECGKTFCEKSALTKHQRTHTGEKPYECNACGKTFSQRSVLTKH
QRIHTRVKALSTS"
BASE COUNT 1250 a 657 c 740 g 1114 t
ORIGIN
1 tacacgtttc gcgttcgctt atgtattatg tgtaatcatg gcacagtatc ctgaagccgt
61 cggagtctgt gtgctggtgc aaggtctggg acaaatttaa gaagagagag aacctaaatt
121 ggtaataaat caataagaaa tatttacatt cactcagtga aaagtgtcat gtctgagctc
181 agcatatatc ggagccacac atggacacct ctccttcctc cactaagagc ggaaaatgaa
241 caaatcccag gaacaagtgt cattcaagga tgtatgtgtg gacttcactc aggaagagtg
301 gtatctgctg gaccctgctc agaagattct atacagagat gtgatcctgg aaaattatag
361 caatcttgtc tcagtagggt attgcattac taaaccagaa gtgatcttta agatcgagca
421 aggagaagag ccctggatat tagaaaaagg attcccaagc cagtgccacc cagaaaggaa
481 atggaaagtt gatgacgtgt tagagagcag ccaggaaaat gaagatgacc atttttggga
541 gcttctattc cacaacaaca aaacagtaag tgtagaaaat ggagatagag gaagcaaaac
601 tttcaatttg ggcacagacc ctgtttcttt aagaaattat ccctataaaa tatgtgactc
661 atgtgaaatg aatttgaaaa atatttcggg cttaattatt agtaaaaaga actgttccag
721 aaagaagcct gatgagttta atgtatgtga gaaattgctc cttgatatta ggcatgagaa
781 aatccctatt ggagagaagt cttataaata tgatcaaaaa aggaatgcca ttaattatca
841 ccaggatctc agtcagccaa gttttggcca atcttttgag tatagtaaaa atggacaagg
901 cttccatgat gaggcagcat tttttacaaa taagagatct cagataggag agacagtctg
961 taaatataac gaatgtggaa gaaccttcat tgaaagttta aagctgaata tatctcaaag
1021 acctcatttg gaaatggagc cgtatggatg cagtatttgc gggaagtcct tctgcatgaa
1081 tttaaggttt ggacatcaga gagctcttac aaaggacaat ccttatgaat ataatgaata
1141 tggggaaatc ttctgtgaca attcagcttt cattatccat cagggagctt acacaagaaa
1201 gattctccgt gaatataaag tgagtgacaa aacctgggaa aagtcagctc tcttaaaaca
1261 tcaaatagta cacatggggg gaaagtctta tgattacaat gaaaatggga gtaatttcag
1321 caagaagtca catcttaccc agcttcggag agctcacaca ggagaaaaaa cctttgaatg
1381 tggtgaatgt gggaaaacct tctgggagaa gtcaaacctc actcaacatc agagaacaca
1441 cacaggagag aagccctatg aatgtactga atgtgggaaa gccttttgcc agaaaccaca
1501 cctgaccaac catcagcgaa cacatacagg agaaaaaccc tatgaatgta agcaatgtgg
1561 aaaaacattc tgtgtgaagt caaacctcac tgaacatcag agaacacaca caggggagaa
1621 gccctatgaa tgtaatgcat gtgggaaatc cttctgccac agatcagccc tcactgtgca
1681 tcagagaaca cacacagggg agaaaccgtt tatatgtaat gaatgtggaa aatccttctg
1741 tgtgaagtca aacctcattg tacatcaaag aactcacact ggggagaaac catataagtg
1801 taatgaatgt gggaaaacct tctgtgaaaa atcagctctc actaaacatc agaggactca
1861 cacaggggag aagccgtatg agtgtaatgc atgtgggaag acctttagtc agaggtcagt
1921 gctcaccaaa catcagagaa ttcacacaag ggtgaaagct ctttcaacat cctgaatgtt
1981 agaagccttc atacacttgt gaaattggtt atacagtttc aaaaaaggag atcagagaaa
2041 gccaaagaat gtcagaaatt tgtagaaaat gacttcttgt ttgaatatgt aaaagctttc
2101 aagaaaaatt aaaacttttc attagaaaat ttgtactgag gggaattcta ttcatctaag
2161 taatatggtg aaaatattta tctggaattt atgttgttta gtgttatatt ccagacgtga
2221 taccaaaatt ttgttgcaaa tataatggac aatatttatt tatacccata ttcacagtgg
2281 aatctgaagc ttataaaagt tgaatgacag cagcattaaa catatatgtg aagagtcccc
2341 gatgtttgta gaccttatgt gagtatgcaa atatataaat ttgagtatgc ttgatttgta
2401 tattggaact caacatgatc ataaggagaa gatacgtacc cttaattgag taactactat
2461 ggtatttgtt aatattttct acactaaata ccattggtgt ctttataggt tgacataatt
2521 atatatgtgt atgtacatat gtttgtgtgt atatgtaaat atatttctac acacatactt
2581 aaatatagtg atgtgctagt ataacctcat actgacttaa aagttctgat tgttaaattt
2641 taaggaattt tgtgagccag ttattaaaag cagtcattat ttaaaatatg taaacttaca
2701 gttaaaaaca aaggtaataa atactcagca ctcatcactt cctaattatt ttgctacatt
2761 tcactattac ctttgctgtt ttacttattt aatctgtatg atgaaaatac tgtataatag
2821 tgtgcactgc acatctgtct cttcccagct ccacattcag tgctgtcttg gtagcttgga
2881 cttagtggga gtgtttacac catggaaatt gacaaactat aaatcagggt tttaattttc
2941 tcagagaacc tgctgtcaaa tatttacagc acatcactgt gtatatatga aaacgtattt
3001 ggcaatacaa accacatacc ccttctattt cctgacataa ataaatggct atggccattt
3061 acagctgaac cacgtcttca agaaagaagc caaaaatatt tccgtgaggt ttttaactac
3121 ctctgaatct gtcctactct aaatactacc ggagtctctt tgtaggttgg ccagtatatg
3181 tttttagtga aatattattt cacaaagaac tatatcacgt acctttcctc tgactgtttc
3241 ctggcatata tgcatgaata tggccattat tgaactatca cttcagtaaa gaagttaaac
3301 agtacttttc tgaggttttt cagctacctc tgggtcattc tgtaatgtaa atgttgttaa
3361 taagaatggt ttttacataa attatgcaaa ggttaacaag cagtaacact gcactcctca
3421 aaaagtggcg gtatgtaatg aaaggccctt ttgatatcct tgatttttca ttgtgtatct
3481 gtttgggcac ggtctatgta acactagttc tgcgtattag tattttagag tatctctgcc
3541 tcccttgtcc tgttgtttct tttgccccct tggaacacat tggtcagcag ttctaagaga
3601 cactgcccac atgatggcca ttccctactt catccttgct gagctaaatt ttatattttt
3661 gtgcatcctt ctcccagatg acttaggtgg taagtccaga ttagtcaaag ctaatcatgg
3721 aagttccatt ttaatgattc tgttggggtg aacttgggag c
//