LOCUS BC132877 1887 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens HHIP-like 1, mRNA (cDNA clone MGC:164508
IMAGE:40146899), complete cds.
ACCESSION BC132877
VERSION BC132877.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1887)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1887)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: I Column: 19.
FEATURES Location/Qualifiers
source 1..1887
/db_xref="H-InvDB:HIT000390930"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164508 IMAGE:40146899"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCGCTCCA"
gene 1..1887
/gene="HHIPL1"
/gene_synonym="UNQ9245"
/db_xref="GeneID:84439"
/db_xref="HGNC:HGNC:19710"
CDS 34..1860
/gene="HHIPL1"
/gene_synonym="UNQ9245"
/codon_start=1
/product="HHIP-like 1"
/protein_id="AAI32878.1"
/db_xref="GeneID:84439"
/db_xref="HGNC:HGNC:19710"
/translation="MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSD
FGCCDEGRDAELTRRFWALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFT
PLRTVPGLCQDYCLDMWHKCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPY
LLVNKNLNSNLGHVVADAKGCLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLV
WAYLPDRSRLGKPFLNISRVVLTSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRS
SEWIRISEFRVSEDDENAVDHSSERIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGG
MAGDPFGTFGNAQNKSALLGKVLRIDVDRKERGLPYGIPPDNPFVGDPAAQPEVYALG
VRNMWRCSFDRGDPSSGTGRGRLFCGDVGQNKFEEVDVVERGGNYGWRAREGFECYDR
SLCANTSLNDLLPIFAYPHTVGKSVTGGYVYRGCEYPNLNGLYIFGDFMSGRLMSLQE
NPGTGQWQYSEICMGHGQTCEFPGLINNYYPYIISFGEDEAGELYFMSTGEPSATAPR
GVVYKIIDASSCKARSAMPGYVPAPSVCSSLTSQPFILQWWK"
BASE COUNT 329 a 609 c 607 g 342 t
ORIGIN
1 gtccctccgc ctcttccccc gcggggcgta gcgatggccc gggccagggc cggggcgctg
61 ctggcgcttt gggtgctcgg ggccgccgcg catccgcagt gcctggactt caggccgccc
121 ttccggccga cgcagccgct gcgcctctgc gcgcagtact cggacttcgg ctgctgcgat
181 gaggggcgcg acgccgagct gacccgccgc ttctgggccc tggcgagccg cgtggacgcc
241 gccgagtggg ccgcgtgcgc cggctacgcg agggacctgc tgtgccagga atgctcgccg
301 tatgcagccc acctctatga cgccgaggac ccattcacgc ccctgcgcac ggtgcccggg
361 ctctgccagg attactgcct ggacatgtgg cataagtgcc gggggctgtt ccgtcacctg
421 tcaactgacc aggagctctg ggcgctggag ggcaaccttg ccaggttctg ccgctacctg
481 tccctggatg acacggacta ctgcttccct tacctgctgg tcaacaagaa cctcaactca
541 aacctgggcc acgtggtagc cgatgccaag ggctgcctgc agctgtgcct ggaggaggtg
601 gccaacgggc tgcgcaaccc cgtggccatg gtccatgcca gggatggcac ccaccgcttc
661 ttcgtggccg agcaggtggg gctggtgtgg gcctacctgc ccgaccgctc gaggctgggg
721 aagcctttcc tgaacatcag ccgggtggtg ctcacctcgc cctgggaggg tgacgagcgt
781 ggcttcctgg gcattgcctt ccaccccagc ttccagcaca accgcaggct ctacgtctac
841 tactcagtgg gtatccgcag cagtgagtgg atccgcatca gcgagttcag agtctccgag
901 gatgacgaga acgccgtgga ccacagctct gagaggataa tcctggaggt caaagaacca
961 gcctcaaacc acaacggggg ccagctgctt ttcggggatg acgggtacct ctacatcttc
1021 actggagatg gcgggatggc cggagacccc tttgggacat ttggaaatgc ccaaaacaag
1081 tcggcgctgc tgggcaaggt gctgcgcatc gacgtggacc gtaaggagcg cggcctgccc
1141 tacggcatcc cgcccgacaa cccgttcgtg ggcgaccccg cggcgcagcc cgaggtctac
1201 gccctgggcg tgcgcaacat gtggcgctgc tccttcgacc gtggcgaccc ctcctcgggc
1261 actggccgcg ggcgcctctt ctgcggcgac gtgggccaga acaagttcga ggaggtggac
1321 gtggtggagc gcggcggcaa ctatggctgg cgcgcgcgcg aagggttcga gtgctacgac
1381 cgcagcctgt gcgccaacac ctctctcaat gacttgctgc cgattttcgc ctacccgcac
1441 acggttggca agtcggtcac agggggctac gtgtaccggg gctgcgagta ccccaacctg
1501 aacggcctct acatttttgg ggatttcatg agcgggcgtc tgatgtccct ccaagagaac
1561 ccagggacag gccagtggca gtacagtgag atctgcatgg gccacggcca gacctgtgag
1621 ttcccaggcc tcatcaacaa ctactacccg tacatcatct ccttcgggga ggacgaggcc
1681 ggggagctgt acttcatgtc gacaggggag ccgagtgcca cagctccacg cggagttgtc
1741 tacaaaataa ttgacgcatc cagctgtaag gccagaagcg ccatgcccgg ctatgtccca
1801 gctccttccg tgtgcagctc attgacgtct cagccgttca ttttacagtg gtggaaatga
1861 gcacaaagac acgaagtcat gggcctg
//