LOCUS BC132871 3554 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens cutaneous T-cell lymphoma-associated antigen 1, mRNA
(cDNA clone MGC:164502 IMAGE:40146893), complete cds.
ACCESSION BC132871
VERSION BC132871.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: I Column: 13.
FEATURES Location/Qualifiers
source 1..3554
/db_xref="H-InvDB:HIT000390924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164502 IMAGE:40146893"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCTTGTGT"
gene 1..3554
/gene="CTAGE1"
/gene_synonym="CTAGE-1"
/gene_synonym="CTAGE-2"
/db_xref="GeneID:64693"
/db_xref="HGNC:HGNC:24346"
/db_xref="MIM:608856"
CDS 38..2275
/gene="CTAGE1"
/gene_synonym="CTAGE-1"
/gene_synonym="CTAGE-2"
/codon_start=1
/product="cutaneous T-cell lymphoma-associated antigen 1"
/protein_id="AAI32872.1"
/db_xref="GeneID:64693"
/db_xref="HGNC:HGNC:24346"
/db_xref="MIM:608856"
/translation="MRPDSHPYGFPWELVIRAAVAGFFAVLFLWRSFRSVTSRLYVRR
EKKFAVALSGLIEEKCKLLEKFSLVQKEYEGYEVESSLKNASFEKEATEAQSLEATCE
KLNRFNSELVHEILCLEKELKEEKSKHSEQNELMADISKRIQSLEDESKSLKSQVAEA
KMTFKRFQANEERLEIEIQDAWKENSELQESQKQLLQEAEVWKEQVSELIKQKRTFED
SKVHAEQVLNDKENHIKTLTERLLKMKDGVAMLEEDVTDDDNLELEMNSESEDGAYLD
NPPKGALKKLIHAAKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASL
QSENTHFESENQKLQQKLKVMTELYQENEMKLYRKLIVEEKCRLEKEEKLSKVDEMIS
HATEELETYRKRAKDLKEFEKTIHFYQKKIILHEKKAHDNWSAAWTAERNLNDLRKEN
AHNRQKLTEIEFKIKLLEKDPYGLDVPNTAFGRQHSPYGPSPLGWPSSETRASLYPPT
LLEGPLRLSPLLPRGGGRGSRGPGNPPDHQITKERGESSCDRLTDPHRAPSDAGPLAP
PWEQDYRMMFPPPGQSYPDSALPPQRQDRFYSNCARLSGPAELRSFNMPSLDKMDGSM
PSEMESSRNDTKDNLGNLKVPDSSLPAENEATGPGFVPPPLAPIRGLLFPVDTRGPFI
RRGPPFPPPPPGTVFGASPDYFSPRDVPGPPRAPFAMRNVYLPRGFLPYRPPRPAFFP
PAPTF"
BASE COUNT 1134 a 667 c 703 g 1050 t
ORIGIN
1 gttgctacgc agggttgtgg cagcactgac tgaaggtatg agacccgatt ctcatcctta
61 tggttttcca tgggaattgg tgatacgtgc agctgttgct ggattttttg ctgttctctt
121 cttgtggaga agttttagat cagttacgag tcggctttat gtgagaagag agaaaaagtt
181 tgctgtggca ctttctggac taattgaaga aaaatgtaaa ctacttgaaa aatttagcct
241 tgttcaaaaa gagtatgaag gctatgaagt agagtcatct ttaaagaatg ccagctttga
301 gaaggaggca acagaagcac aaagtttgga ggcaacctgc gaaaagctga acaggttcaa
361 ttctgaactt gtgcatgaaa tactctgtct agaaaaagag ttaaaagaag agaaatctaa
421 acattctgaa caaaatgaat tgatggcgga tatttccaaa aggatacagt cgctagaaga
481 tgagtcaaaa tccctcaaat cacaagtagc tgaagccaaa atgaccttca agagatttca
541 agcgaatgaa gaacggttgg agatagaaat acaagatgct tggaaagaaa attctgaact
601 tcaggaaagc cagaaacagc ttttgcaaga agctgaagta tggaaagaac aagtgagtga
661 acttattaaa cagaaaagaa catttgaaga ctccaaagta catgcagaac aagttctaaa
721 tgataaagaa aatcacatca agactctgac tgaacgcttg ctaaagatga aagatggggt
781 tgctatgctt gaagaagatg taacggatga tgataacttg gaattagaaa tgaacagtga
841 atcggaagat ggtgcttact tagataatcc tccaaaagga gctttgaaga aactgattca
901 tgctgctaag ttaaatgctt ccttaaaaac cttagaagga gaaagaaacc aaatttatat
961 tcaattatct gaagttgata aaacaaagga agagcttaca gagcatatta aaaatcttca
1021 gactgaacaa gcatctttgc agtcagaaaa cacacatttt gaaagtgaga atcagaagct
1081 tcagcagaaa cttaaagtaa tgactgaatt atatcaagaa aatgaaatga aactctacag
1141 gaaattaata gtagaggaaa aatgccggtt agagaaagaa gagaaacttt ctaaagtaga
1201 cgaaatgatc agccatgcca ctgaagagct ggagacctac cgaaagcgag ccaaagatct
1261 taaagaattt gagaaaacta ttcattttta tcaaaagaag attattctcc atgagaaaaa
1321 agcacatgat aattggtcgg cagcttggac tgctgaaaga aacctcaatg atttaaggaa
1381 agaaaatgct cacaacagac aaaaattaac tgaaatagag tttaaaataa aacttttaga
1441 aaaagatcct tatggacttg atgttccaaa tacagcattt ggcagacagc attccccata
1501 tggtccctca ccattgggtt ggccttcatc tgaaacgaga gcttctctct atcctccaac
1561 tttgttggaa ggtcctctca gactctcacc tttgcttcca cggggaggag gaagaggctc
1621 cagaggccca gggaatcctc cggaccatca gattaccaaa gaaagaggag aatcaagctg
1681 tgataggtta actgatcctc acagggctcc ttctgacgct gggcccctgg cacctccgtg
1741 ggaacaggac tataggatga tgtttcctcc accaggacaa tcatatcctg attcagctct
1801 ccctccacaa aggcaagaca gattttattc taattgtgct agactctctg gaccagcaga
1861 actcagaagt tttaatatgc cttctttgga taaaatggat gggtcaatgc cttcagaaat
1921 ggaatccagt agaaatgata ccaaagataa tcttggtaat ttaaaggtgc ctgattcatc
1981 tctccccgct gaaaatgaag caactggccc tggctttgtt cctccacctc ttgctccaat
2041 cagaggttta ttgtttccgg tagatacaag gggcccgttc ataagaagag gacctccttt
2101 ccccccacct cctccaggaa ccgtgtttgg agcttctcca gattattttt ctccaaggga
2161 tgtcccaggt ccaccacgtg ctccatttgc aatgagaaat gtctatttac cgagaggttt
2221 tcttccttac cgtcccccaa gacctgcatt tttcccccca gcccccacat tctgaaggta
2281 gaatgagttt ccatcagggt tgagtccgac ttcaaatgag cctgctgctg aacatccaga
2341 acgacagcaa gaaacctaac aacatgtttg ccctcttcaa aagtaatttt gactgatctc
2401 attttcagtt taagtaactg ctgttactta agtgattaca cttttgttca gattgaaact
2461 taatggaact ataattccca ggatagtatt ttgtaaatga ggatgattta aatatgaatc
2521 ttatgagtaa attatttcat tttattttat tctagatagt ataactttta atttgattaa
2581 tccactatta tataaagaat ggtgggagtt ttatatatgt aatcttgcag gtggggaggc
2641 tttaaattgt ctttatgtca agaactgtat ttactgtggt tgtagacaaa tgtgaaagta
2701 actttatgct taaataagtt ttagttgatt aaaaaaattt aaaaaattta aaaaaagaaa
2761 tatataaata tgcacaggtg ggaaggtaga atactatgta actgttagaa tatttcactt
2821 taaaccaaga tgatcttgga tctcctgtct tatagatttt atatcctctt tcagtacttt
2881 gagagtgtaa aacatttata gcagaaagta ttcgtgtttc ctctgttttc ctcaagaatg
2941 gtttcttcgc cctccctttc cttcccttcg tcttccctaa gctaatttct tcctatgttt
3001 gtcatcatat cattacataa ttgtgttgtt atttcttttg ttttattttt atttggtggg
3061 aacaacttta tccagaactt ttacttgccc cagaattata tagatcagtt tctcctgact
3121 tctttcccaa cctttacctc tgttggtgtt ctaatagttt tagttttatg ttctgctttt
3181 ctcttgctgt ggcaagggga aggagtaaat ctaagatagt gcttaattgc agttggtgaa
3241 tttgatctct gattgagctc tcttctctgg aattctgtta aaagatgaaa tgtatcgtgt
3301 tccctgagag acgccctcaa attttggatt agtccttcat gcaagctggg ccaccaagcc
3361 attgcttctt ttggggacaa cctgccctca cttttaaaaa gcatcctagc tcacatgcct
3421 cccctagcag ttaatgccac tccagtctct gcttgaatgt aataaaagaa aagaaaagta
3481 actatttgag acatgaggtg cccttattgt acactggggc ttcctataca ttttccgtct
3541 tcccttgaac cacc
//