LOCUS BC132832 4237 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens ankyrin repeat and sterile alpha motif domain
containing 1A, mRNA (cDNA clone MGC:164463 IMAGE:40146854),
complete cds.
ACCESSION BC132832
VERSION BC132832.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4237)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4237)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: G Column: 22.
FEATURES Location/Qualifiers
source 1..4237
/db_xref="H-InvDB:HIT000390885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164463 IMAGE:40146854"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_364"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TGGCCCAC"
gene 1..4237
/gene="ANKS1A"
/db_xref="GeneID:23294"
/db_xref="HGNC:HGNC:20961"
/db_xref="MIM:608994"
CDS 80..3484
/gene="ANKS1A"
/codon_start=1
/product="ankyrin repeat and sterile alpha motif domain
containing 1A"
/protein_id="AAI32833.1"
/db_xref="GeneID:23294"
/db_xref="HGNC:HGNC:20961"
/db_xref="MIM:608994"
/translation="MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGG
GGSGGGGGGLGSSSHPLSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRN
DALTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYG
HTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTP
LHLAARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIK
DNHGLTALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQ
KSQGDVEKAVTELIIDFDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAE
AAGVKPAGVRPRERPPPPAKPPPDEEEEDHIDKKYFPLTASEVLSMRPRIHGSAAREE
DEHPYELLLTAETKKVVLVDGKTKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSP
VCEVGQDPFQLLCTAGQSHPDGSPQQGACHKASMQLEETGVHAPGASQPSALDQSKRV
GYLTGLPTTNSRSHPETLTHTASPHPGGAEEGDRSGARSRAPPTSKPKAELKLSRSLS
KSDSDLLTCSPTEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGI
DFSQERQKISGSRTLEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRD
IGISDPQHRRKLLQAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSS
IDTVKNLWELELVNVLKVQLLGHRKRIIASLADRPYEEPPQKPPRFSQLRCQDLLSQT
SSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHREAKLTLR
PPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKST
EHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQ
TSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQKSRATGASAAEMIETKSSK
PVPKPRVGVRKSALEPPDMDQDAQSHASVSWVVDPKPDSKRSLSTN"
BASE COUNT 1020 a 1214 c 1219 g 784 t
ORIGIN
1 cggagacgga aagtttggga gcccgagcag gctcggctgc agcctcgggg agggggtcca
61 gcgggtggcg gccctgggga tggggaagga gcaggagctg ctggaggcgg cccgcaccgg
121 gcacctcccg gcggtggaga agctgctgtc cgggaagcgg ctctcctcag gctttggggg
181 cggcggcggc ggtggctctg ggggcggcgg cggcggcagc ggcggcggcg gcggcggcct
241 cggctcttcc agccaccccc tctccagtct gctcagcatg tggagagggc caaatgtgaa
301 ctgtgttgac agcactggct acacacccct gcaccatgct gctttgaatg gccataagga
361 tgtggtcgag gttcttctga ggaacgatgc gctgaccaac gtggctgact caaaaggctg
421 ctaccctctg catttggcag cctggaaagg agatgcccag atagtgcggt tgctcatcca
481 tcaagggcct tcacacacca gagtcaatga acagaacaat gacaacgaga cagccctgca
541 ttgtgcagcg cagtatggcc acacagaggt ggtgaaggtg ctcttagagg agctgacgga
601 ccccaccatg cgcaacaaca aattcgagac ccctttggac ctggcagcac tgtatgggcg
661 actggaggtg gtgaaaatgc tccttaatgc acaccccaac ctcctgagct gcaacactaa
721 gaagcacacc cctctgcact tggcagcaag gaatggccac aaagccgtgg tccaggtcct
781 cctcgatgct ggcatggaca gcaactacca gacggagatg ggcagtgctt tgcatgaggc
841 tgctttgttt ggcaagaccg atgtggtgca aatcctgctg gctgcaggaa ctgacgtcaa
901 cataaaagat aaccatggac tgactgccct agacactgtt cgggaactgc cttctcaaaa
961 gagccagcaa atagcagcat taattgaaga tcacatgact ggaaaaagaa gtacaaaaga
1021 agtagataaa acccccccac cccagccacc tctcatctcc agtatggact ccatatcaca
1081 gaagtctcag ggtgacgtgg agaaagcagt gactgaactg attatagatt ttgatgcaaa
1141 tgctgaagaa gagggtccct acgaagctct gtataatgcc atctcctgcc attcgttgga
1201 cagcatggcc agcgggcgat catctgacca agactccacg aacaaggagg ctgaggcagc
1261 aggagtgaaa cctgctggag tgaggcctag ggaacgtcca ccacctccag caaagccacc
1321 gcccgatgaa gaggaagaag accacataga taagaagtat tttcccttga cagcttctga
1381 ggttctgtcc atgagaccta ggattcatgg gagtgcagcc cgggaagaag acgaacaccc
1441 ttatgaactg ttgttaacag cagagacaaa gaaagtggtg ttggtggatg gaaaaacaaa
1501 agaccacagg cggagcagca gcagccggag ccaggactct gcggaggggc aggacgggca
1561 ggtcccagag cagttctcag gcctcctcca cggctcctcc ccggtgtgcg aggtggggca
1621 ggaccctttc cagctgctct gtaccgctgg ccagagccat ccagacgggt ccccccagca
1681 gggcgcctgc cacaaggcca gcatgcagct ggaggagacg ggtgtgcatg ctcctggagc
1741 ctcccagccc agtgccctgg accagagcaa gagagtgggc tacctcacag gcctgcccac
1801 caccaacagc cgctcgcacc ctgaaacttt gactcacaca gcatctccgc accctggtgg
1861 tgctgaggaa ggagaccgga gtggggccag gagccgagcg cctcccacta gcaaacccaa
1921 agctgaactc aaactcagcc gcagcttgtc caagtctgac tctgatctcc tgacctgctc
1981 acccacagag gacgctacca tggggagtcg gagtgagtcc ttatccaact gcagcattgg
2041 gaagaaaagg ctagagaagt caccctcctt cgcctcggag tgggatgaga ttgagaaaat
2101 catgagttct attggagaag ggattgactt ttctcaggaa cggcagaaga tctcaggttc
2161 acggacgctg gagcagagtg tcggggagtg gctggagtcg attgggctgc agcagtatga
2221 gagcaagttg cttctgaatg gctttgacga tgtccacttc ctggggtcta atgtgatgga
2281 agagcaggac ctgcgggaca tcggcatcag cgacccacag caccggcgga agctgctcca
2341 ggcggcacgc tccctaccca aggtgaaggc tctgggttat gacgggaaca gcccccctag
2401 cgtgccctcc tggctggact ccctggggct gcaggactac gtccattcct tcttgtcaag
2461 tggttacagc tccattgaca ccgtgaagaa cctctgggag ctagagctcg tcaatgtcct
2521 gaaggtccag ctgctcggcc atcgcaagcg catcatcgcc tccctcgcag acagaccgta
2581 cgaggagccg ccccagaagc cccccagatt ctcccagctg aggtgccaag atttgctctc
2641 ccagacgtca tccccactga gtcagaatga ttcctgcact gggcggtcgg cagatctgct
2701 gctgcctcca ggggacacag gcaggaggcg ccatgacagt ctccatgacc ctgcggcacc
2761 ctcccgagcg gagcgcttca ggatccagga ggagcaccgt gaggccaagc tgaccctgcg
2821 gcccccaagc ctggcagccc cctacgcccc agtgcagagt tggcaacacc agccagagaa
2881 actcatcttc gagtcctgtg gttatgaagc caattatctg ggctccatgc tgatcaaaga
2941 tctgcgaggg acagaatcca cgcaagacgc ctgtgccaag atgcggaaat ctacggagca
3001 catgaagaag atccccacca tcatcctgtc catcacatac aaaggtgtca agttcatcga
3061 tgcctccaac aagaacgtca ttgcagagca cgagatccgg aacatttcct gtgcggccca
3121 ggacccggag gacctctgta cctttgccta catcaccaag gacctgcaga ccagccacca
3181 ctattgccat gtgttcagca ccgtggatgt gaacctgacc tacgagatca tcctgacgct
3241 ggggcaggcc ttcgaagtgg cctatcagtt ggccctgcag gcccagaagt ccagggcgac
3301 gggcgcctct gcagctgaga tgattgaaac aaaatcttcc aaaccggtgc ctaagcctcg
3361 ggtcggcgtg aggaaatccg cactggaacc acctgatatg gaccaagatg cccaatccca
3421 tgccagtgtc tcctgggttg tggaccccaa accagactct aagcggagcc tcagcaccaa
3481 ctgagccact gaggaaccac actgtgctgc ggaaacatag acgtgggggc ataggctccc
3541 gctgccacca ccgccatcgc ctcacctgca gctctgaaga cccaggcctc acctccgcct
3601 gcaggacctc ctcttggcca cttggcctgg gcctgccacc accacgtcct gcagaacgag
3661 ccctgccttg gctgtggaga agcactccag gccgctagca gatgggactg gcattccaga
3721 gggtcaagaa gtgacttgtt cagaacacat tgtttttaac agaaaaaaaa tctttttata
3781 aaatgaactt ttaacacttg gctcaaacct ctaggtcata ctgccaatct ttagacaaat
3841 ggccatgggg cagaggacag gggagctgag gttggttcag aggccagcct gcatagcctc
3901 tgtcctcagg acggaacttg ggtgcagctc agtgggtcgg aagagaaggc ggtggcctgt
3961 gggtgagggg aacggagcag gctcaggcag aattgagtac ggtgcgtctg cttttcaaac
4021 ccaaccatat cagctgctgc tctttatgaa ctgcccaact tcctgtccct ttcaggggct
4081 agacacaggc ttctcgtaag aacacagcct tagaggcacc tgagcaactc aaaggtttcc
4141 ggtccatttc tggggttccc gatgggaagg ttcagtggcc aaatgaagat aagtgtgcag
4201 tttctagtgc tgggaagtct tagccagcac cagagcg
//