LOCUS       BC132814                5235 bp    mRNA    linear   HUM 06-DEC-2007
DEFINITION  Homo sapiens FYVE, RhoGEF and PH domain containing 5, mRNA (cDNA
            clone MGC:164445 IMAGE:40146836), complete cds.
ACCESSION   BC132814
VERSION     BC132814.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5235)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 5235)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 9 Row: G Column: 4.
FEATURES             Location/Qualifiers
     source          1..5235
                     /db_xref="H-InvDB:HIT000390867"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:164445 IMAGE:40146836"
                     /tissue_type="Pooled, cerebellum, kidney, placenta,
                     testis, lung, colon, liver, heart, thyroid, bladder,
                     uterus, PCR rescued clones"
                     /clone_lib="NIH_MGC_364"
                     /lab_host="DH10B"
                     /note="Vector: pCR-XL-TOPO with reversed insert; Clone
                     identification sequence tag: TTTATATT"
     gene            1..5235
                     /gene="FGD5"
                     /gene_synonym="ZFYVE23"
                     /db_xref="GeneID:152273"
                     /db_xref="HGNC:HGNC:19117"
     CDS             472..4137
                     /gene="FGD5"
                     /gene_synonym="ZFYVE23"
                     /codon_start=1
                     /product="FYVE, RhoGEF and PH domain containing 5"
                     /protein_id="AAI32815.1"
                     /db_xref="GeneID:152273"
                     /db_xref="HGNC:HGNC:19117"
                     /translation="MGQDAEDTSEEPPEKEELAGVQEAETATDCPEVLEEGCEEATGV
                     TGGEQVDLSEPPDHEKKTNQEVAAATLEDHAQDESAEESCQIVPFENDCMEDFVTSLT
                     GSPYEFFPTESTSFCSESCSPLSESAKGLESEQAPKLGLRAEENPMVGALCGQCGSLQ
                     GGAAEGPAAPDVVVVLEEEALDDALANPYVMGVGLPGQAAPGEGGQAASDALGGYGSK
                     EELNCEAEGGLVPADRKNTSTRVRPHSGKVAGYVPETVPEETGPEAGSSAPGIGGAAE
                     EVGKTLLSLEGKPLEASRALPAKPRAFTLYPRSFSVEGREIPVSVYQEPEGSGLDDHR
                     IKRKEDNLSLSCVIGSSGSFSQRNHLPSSGTSTPSSMVDIPPPFDLACITKKPITKSS
                     PSLLIESDSPDKYKKKKSSFKRFLALTFKKKTENKLHVDVNVSSSRSSSESSYHGPSR
                     ILEVDRRSLSNSPQLKSRTGKLRASESPSSLIFYRDGKRKGVPFSRTVSRVESFEDRS
                     RPPFLPLPLTKPRSISFPSADTSDYENIPAMNSDYENIQIPPRRPARAGAFTKLFEDQ
                     SRALSTANENDGYVDMSSFNAFESKQQSADQDAESAYTEPYKVCPISSAAPKEDLTSD
                     EEQRSSEEEDSASRDPSVTHKVEGQSRALVIAQELLSSEKAYVEMLQHLNLDFHGAVM
                     RALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQKVADVFL
                     AREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKHRLLRV
                     VQRLFQYQVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHI
                     EHSVRGQGDLLQPGREFLKEGTLMKVTGKNRRPRHLFLMNDVLLYTYPQKDGKYRLKN
                     TLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYKAQ
                     ALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCDFSLTLRRHHCHACGKIV
                     CRNCSRNKYPLKYLKDRMAKVCDGCFGELKKRGRAVPGLMRERPVSMSFPLSSPRFSG
                     SAFSSVFQSINPSTFKKQKKVPSALTEVAASGEGSAISGYLSRCKRGKRHWKKLWFVI
                     KGKVLYTYMASEDKVALESMPLLGFTIAPEKEEGSSEVGPIFHLYHKKTLFYSFKAED
                     TNSAQRWIEAMEDASVL"
BASE COUNT         1277 a         1367 c         1511 g         1080 t
ORIGIN      
        1 gggaacaaag ccctggtgtc tcccgagtcc tctgcggaag aggaagagga gcgtgaagag
       61 ggaggcgagg catgtggcct ggagggtaca ggagctggtg aggattcagt ggcccctgct
      121 gctccgggtg caggagcgct gagcagggag ggtgaggaag gcacagacct tgctcttgag
      181 gatgaagggg agggctgcgc tgatgagcca gggacactgg agcaggtgtc cagaagtgag
      241 gaggaagaga agctagtgca gccacacagg gagtgcagcc tggaggacag tgggccttgg
      301 gctggagagg gggtcttcca gagcgacctc ctcctgcctc acatccatgg agaggaccag
      361 gagccccccg acacccccgg ggaggcagag gaggatgatg aggaaggctg tgccagcaca
      421 gacccagcag gggcagatga gggttcgggt cctgacaggc ccacggagga catgggacag
      481 gatgctgagg acaccagtga ggagccccct gagaaggagg agctggccgg ggtccaggag
      541 gcagagacag ccacagactg ccctgaagtt cttgaggagg gatgtgaaga ggccacgggt
      601 gtcacaggtg gggaacaggt tgacctcagt gaaccacctg accacgagaa gaaaaccaac
      661 caagaagtgg cagccgccac cctggaggac catgcacagg atgagtccgc cgaggagagc
      721 tgccagattg tcccttttga gaatgactgc atggaggact tcgtgacttc cctcacagga
      781 agcccctatg agttcttccc aactgagagc acctcttttt gcagcgagag ctgttctcct
      841 ctttctgaat cagcgaaagg tttagaatca gagcaggcac caaagctggg gctgcgtgcg
      901 gaggagaacc ccatggtggg ggctttgtgt ggccagtgtg gctccctaca gggtggagcg
      961 gccgagggtc ccgcagcccc tgatgtggtg gtcgtgctgg aggaggaggc cttggatgat
     1021 gcactggcca acccctatgt gatgggagtg ggcctgcccg gtcaggcggc ccctggagaa
     1081 ggagggcagg ctgcatcgga cgccctgggt ggttatggct cgaaagaaga attgaactgt
     1141 gaggcagagg gtggcctggt tcccgcggac aggaagaaca ccagcacgag ggtccggccc
     1201 cactctggga aggtggccgg ctatgtccca gaaaccgtcc ctgaagaaac cggacctgag
     1261 gcgggctcgt cagcccctgg cattggaggt gccgcagagg aggtgggaaa gacgcttttg
     1321 tcattggagg ggaagccctt ggaagccagc agggccttgc cagcaaagcc cagggccttt
     1381 actttatacc ctcggtcgtt ctccgtggaa ggccgagaga ttccagtgtc cgtgtaccag
     1441 gagcctgagg ggtcagggtt ggatgaccac aggataaaga ggaaagagga caatctctct
     1501 ctgtcgtgtg taattggctc ctctgggagt ttctcccaga gaaaccacct tccgtccagc
     1561 ggcacctcca cgccttcttc catggtcgac atcccacctc ctttcgacct ggcctgcatc
     1621 accaagaagc ccatcacaaa gagctctccc tcactcctga tcgagagcga ctccccggac
     1681 aagtacaaga agaagaagtc atcctttaag cgcttcctgg cactgacgtt taagaagaag
     1741 acggagaaca aattgcatgt ggatgtgaac gtgtcttcct ctaggtcctc ttcagagtcc
     1801 agctaccacg ggccttccag gattctggaa gttgaccgga gaagcctcag caactcccct
     1861 cagcttaagt ctcggactgg gaagctccgg gcttctgaat ccccctcctc cctcatcttt
     1921 tatagagatg gcaagaggaa aggtgtcccc ttcagcagga cggtgtccag agtggagtcc
     1981 tttgaagacc gctcccggcc gcccttcctg cccttgccac tgaccaagcc acggtccatc
     2041 tccttcccca gcgctgacac ttcagactat gagaacattc cagccatgaa ctcggactat
     2101 gagaatatcc agattccacc ccggagacct gccagggctg gcgcgttcac gaagctgttt
     2161 gaagatcaga gcagagccct gtccacagca aacgaaaatg atggctacgt ggacatgagc
     2221 agcttcaacg cctttgagag caaacagcag agtgcagacc aggacgcaga aagcgcctac
     2281 acagagccct acaaagtctg tcccatctcg tcggcagccc ccaaagagga ccttacgtcg
     2341 gatgaagagc agagaagctc ggaggaggag gacagtgctt caagagaccc cagtgtcacc
     2401 cacaaggtgg aaggacagtc cagagccctt gtcatcgcac aggaactgct atcttcagag
     2461 aaagcatacg tggagatgct ccagcactta aatctggatt tccatggagc tgtcatgagg
     2521 gccttggatg acatggacca tgaaggcaga gacacattgg cccgggagga gctgaggcag
     2581 ggcctgagtg aactcccagc catccacgac cttcatcaag gcatcctgga ggagctggag
     2641 gaaaggctgt caaattggga gagccagcag aaggtagctg acgtcttcct ggcccgggag
     2701 caggggtttg atcaccacgc cactcacatc ctgcagttcg acaggtacct aggtctgctc
     2761 agtgagaatt gcctccactc tccccggctg gcagctgctg tccgtgaatt tgagcagagt
     2821 gtacaaggag gcagccagac tgcgaagcat cggctgctgc gggtggttca acgcctcttc
     2881 cagtaccaag tgctcctcac agactattta aacaaccttt gtccggactc cgccgagtac
     2941 gacaacacac agggtgcact gagcctcatc tccaaagtca cagaccgtgc caacgacagc
     3001 atggagcaag gggaaaacct gcagaagctg gtccacattg agcacagcgt ccggggccaa
     3061 ggggatctcc tccagccagg aagggagttt ctgaaggaag ggacgctgat gaaagtaaca
     3121 gggaaaaaca gacggccccg gcacctattt ctgatgaacg atgtgctcct gtacacctat
     3181 ccccagaagg atgggaagta ccggctgaag aacacattgg ctgtggccaa catgaaggtc
     3241 agccgccctg tgatggagaa agtgccctac gctctaaaga ttgagacttc cgagtcctgc
     3301 ctgatgctgt ctgcgagctc ctgtgcagag agggacgagt ggtatggctg tctgagcaga
     3361 gccctccctg aggactacaa ggcccaggcg ctggctgcat tccaccatag cgtggagata
     3421 cgagagaggc tgggggttag ccttggggag aggcccccca ccctggtgcc tgtcacacac
     3481 gtcatgatgt gcatgaactg cggctgcgac ttctccctca ccctgcggcg tcatcactgt
     3541 cacgcctgtg gcaagatcgt gtgccggaac tgttcgcgga acaagtaccc gctgaagtac
     3601 ctgaaggaca ggatggccaa ggtctgcgac ggctgcttcg gggagctgaa gaagcggggc
     3661 agggctgtcc cgggcctgat gagagagcgg cctgtgagca tgagcttccc gctgtcttca
     3721 ccccgcttct cgggcagtgc cttttcatcc gtcttccaga gcattaaccc ctcgaccttc
     3781 aagaagcaga agaaagtccc ttcagccctg acagaggtgg ctgcctctgg agagggctct
     3841 gccatcagtg gctatctcag ccggtgtaag aggggcaagc ggcactggaa gaagctctgg
     3901 tttgtcatca aaggcaaagt tctctacacc tacatggcca gtgaggacaa agtggccttg
     3961 gagagtatgc ctctgctagg cttcaccatt gctccagaaa aggaagaggg cagcagtgaa
     4021 gtaggaccta tttttcacct ttaccacaag aaaaccctat tttatagctt caaagcagaa
     4081 gataccaatt cagctcagag gtggatcgag gccatggaag atgcgagtgt gttatagcag
     4141 ttatcaagca tgtggacttg taacaaattc ttaggtcaat atgtgaatgc ttttagaagc
     4201 taagctgtgg ctcaactcat ccggacacac acctggattc agcaatgagg cctgaccttt
     4261 tttgctataa ccgccccacc actcccctgc ccttgccaac atcttcatga atggaatcct
     4321 taagggatat ttatggacct ctccttttct gtgttttcca cccctacccc cacccgccac
     4381 ccagtaataa actatttcct taccccgcag tgagttaaaa tttagtaaga tgaagatgtg
     4441 gaaaccaatg aaaagtacat ttagaaatgc aggcttttta gtagaaagaa gctcttacag
     4501 tttttactca tgataaatct tatcaccttt caaaaattga ttgtggtgcc tcaggtgaaa
     4561 tgagaagcta tcagtaacag ctactctcat cgaaagcact ttattatttt acggagctgc
     4621 aacctccaat tttgtgtttt ctaagtgatt tacttaagtc aataacagat ggaatcctgt
     4681 ggactaatgt gccaccagtt ttctaacaag ggtgtacata aaatggattt gtgcagacct
     4741 ggctgtggct tgctggtgtg caagcacaca tcactttaga ggggctgcgc cccaccagat
     4801 aggaagggga ggattttctc ctccagtcga ccttgtgacc tgtatactaa cataacttat
     4861 taaaggaggg gtccctcctc ccccagagca gtcctcaaca ctgtcagtgc tggaaatgca
     4921 gccactggca gatctggccc cccagacgtc accgcagggc ctctgaagag tcaaggtctg
     4981 ctttaattta ttgtgtgcct ttctgtgttt acctcactca agctgacaac attgtttatg
     5041 ggaatctatc cttcttttag acacacggta atccttgggc tgtattactg aaggcttttt
     5101 attttttgag aggtgaaaaa aagagaaaac aagttagact ccaaaggtga attcctggtc
     5161 ttggcagatg gctctgggaa cagcgaggga gcacagaagt cgtggcctga ggctgttcta
     5221 tgggcacttg gggct
//