LOCUS BC132792 1364 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens signaling lymphocytic activation molecule family
member 1, mRNA (cDNA clone MGC:164423 IMAGE:40146814), complete
cds.
ACCESSION BC132792
VERSION BC132792.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1364)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1364)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: F Column: 6.
FEATURES Location/Qualifiers
source 1..1364
/db_xref="H-InvDB:HIT000390845"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164423 IMAGE:40146814"
/tissue_type="Testis, PCR rescued clones"
/clone_lib="NIH_MGC_373"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTTCCGTG"
gene 1..1364
/gene="SLAMF1"
/gene_synonym="CD150"
/gene_synonym="CDw150"
/db_xref="GeneID:6504"
/db_xref="HGNC:HGNC:10903"
/db_xref="MIM:603492"
CDS 33..1040
/gene="SLAMF1"
/gene_synonym="CD150"
/gene_synonym="CDw150"
/codon_start=1
/product="signaling lymphocytic activation molecule family
member 1"
/protein_id="AAI32793.1"
/db_xref="GeneID:6504"
/db_xref="HGNC:HGNC:10903"
/db_xref="MIM:603492"
/translation="MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVL
LPLTYERINKSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLEN
LTLGIRESRKEDEGWYLMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLNKTQENGTCTL
ILGCTVEKGDHVAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYICTVSNPISNN
SQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVVILQLRRRGKTNHYQTTVEKK
SLTIYAQVQKPGPLQKKLDSFPAQDPCTTIYVAATEPVPESVQETNSITVYASVTLPE
S"
BASE COUNT 379 a 353 c 328 g 304 t
ORIGIN
1 ggccaggatc ccttccttct cctcattggc tgatggatcc caaggggctc ctctccttga
61 ccttcgtgct gtttctctcc ctggcttttg gggcaagcta cggaacaggt gggcgcatga
121 tgaactgccc aaagattctc cggcagttgg gaagcaaagt gctgctgccc ctgacatatg
181 aaaggataaa taagagcatg aacaaaagca tccacattgt cgtcacaatg gcaaaatcac
241 tggagaacag tgtcgagaac aaaatagtgt ctcttgatcc atccgaagca ggccctccac
301 gttatctagg agatcgctac aagttttatc tggagaatct caccctgggg atacgggaaa
361 gcaggaagga ggatgaggga tggtacctta tgaccctgga gaaaaatgtt tcagttcagc
421 gcttttgcct gcagttgagg ctttatgagc aggtctccac tccagaaatt aaagttttaa
481 acaagaccca ggagaacggg acctgcacct tgatactggg ctgcacagtg gagaaggggg
541 accatgtggc ttacagctgg agtgaaaagg cgggcaccca cccactgaac ccagccaaca
601 gctcccacct cctgtccctc accctcggcc cccagcatgc tgacaatatc tacatctgca
661 ccgtgagcaa ccctatcagc aacaattccc agaccttcag cccgtggccc ggatgcagga
721 cagacccctc agaaacaaaa ccatgggcag tgtatgctgg gctgttaggg ggtgtcatca
781 tgattctcat catggtggta atactacagt tgagaagaag aggtaaaacg aaccattacc
841 agacaacagt ggaaaaaaaa agccttacga tctatgccca agtccagaaa ccaggtcctc
901 ttcagaagaa acttgactcc ttcccagctc aggacccttg caccaccata tatgttgctg
961 ccacagagcc tgtcccagag tctgtccagg aaacaaattc catcacagtc tatgctagtg
1021 tgacacttcc agagagctga caccagagac caacaaaggg actttctgaa ggaaaatgga
1081 aaaaccaaaa tgaacactga acttggccac aggccccaag tttcctctgg cagacatgct
1141 gcacgtctgt acccttctca gatcaactcc ctggtgatgt ttcttccaca tacatctgtg
1201 aaatgaacaa ggaagtgagg cttcccaaga atttagcttg ctgtgcagtg gctgcaggcg
1261 cagaacagag cgttacttga taacagcgtt ccatctttgt gttgtagcag atgaaatgga
1321 cagtaatgtg agttcagact ttgggcatct tgctcttggc tgga
//