LOCUS BC132749 1549 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens chromosome 7 open reading frame 28A, mRNA (cDNA clone
MGC:164380 IMAGE:40146771), complete cds.
ACCESSION BC132749
VERSION BC132749.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1549)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1549)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: D Column: 11.
FEATURES Location/Qualifiers
source 1..1549
/db_xref="H-InvDB:HIT000390802_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164380 IMAGE:40146771"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CATGTACG"
gene 1..1549
/gene="C7orf28A"
/gene_synonym="CGI-43"
/gene_synonym="H_DJ1163J12.2"
/db_xref="GeneID:51622"
/db_xref="HGNC:HGNC:21691"
CDS 76..1524
/gene="C7orf28A"
/gene_synonym="CGI-43"
/gene_synonym="H_DJ1163J12.2"
/codon_start=1
/product="chromosome 7 open reading frame 28A"
/protein_id="AAI32750.1"
/db_xref="GeneID:51622"
/db_xref="HGNC:HGNC:21691"
/translation="MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENK
ILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWM
VMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGG
VKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLN
IVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNL
QHYGRFLTGPLNLNDPDAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASVHP
TLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTV
HMRKTPSVSLTSVHPDLMKILGDINSDFTRVDEDEEIIVKAMSDYWVVGKKSDRRELY
VILNQKNANLIEVNEEVKKLCATQFNNIFFLD"
BASE COUNT 455 a 318 c 384 g 392 t
ORIGIN
1 agtgcggtgt tttagccggt ggctgctgtc tctgggcggg ccgtgggagg ctcccgaggt
61 gggggccggg gcgggatggc tgcagcggcg gccggggccg ggagcgggcc ctgggcggcc
121 caggagaagc agttcccgcc ggcgctgctg agtttcttca tctacaaccc gcgcttcggg
181 ccgcgcgaag gacaggagga aaataagatt ttattttatc atccaaatga ggtagaaaag
241 aatgagaaga ttagaaatgt cggattgtgt gaagctattg tacagtttac aaggacattt
301 agcccatcaa aacctgcaaa atctttacat acacagaaga acagacagtt cttcaatgaa
361 ccagaagaaa atttctggat ggtcatggtt gttcggaatc ctataattga aaaacagagt
421 aaagatggaa aaccagttat tgaatatcaa gaggaggagt tgttggacaa ggtttatagc
481 tcggtgctgc ggcagtgcta cagcatgtac aagcttttta atggtacatt tctgaaagcc
541 atggaagacg gaggcgtcaa gcttctgaaa gaaagattag agaaattctt ccatcggtat
601 ttgcaaacgc tacatttgca gtcatgtgac ctacttgaca tttttggtgg aatcagcttc
661 ttcccgttgg ataaaatgac ttatttgaaa atccagtcct ttattaatag aatggaggaa
721 agcctgaata tagtcaaata cactgctttt ctctataacg atcagctcat ctggagtgga
781 ttagaacaag atgacatgag aattttatac aaatacctta ccacctccct tttcccaagg
841 cacatcgaac ctgagttagc aggaagggat tctccaataa gagcagaaat gccaggaaat
901 cttcaacact atggaagatt tcttaccgga cccttgaacc tcaatgatcc agatgcaaaa
961 tgcagattcc ccaaaatttt tgtaaataca gatgacactt atgaagagct ccatttaatc
1021 gtttataagg ccatgagtgc ggctgtgtgc tttatgatcg acgcctctgt ccacccaacg
1081 ttggattttt gccgaagact ggacagcatc gttgggcccc agctcacagt gctggcctct
1141 gacatctgtg aacagtttaa catcaacaag aggatgtccg ggtctgagaa agaaccccag
1201 tttaagttta tctacttcaa ccacatgaat ctcgccgaga agagcacagt tcacatgagg
1261 aaaacgccca gcgtgtcgct cacttccgtg cacccggatt taatgaagat tctcggtgac
1321 atcaacagtg actttaccag agtggatgaa gatgaggaga tcattgtgaa ggccatgagt
1381 gattactggg ttgttggaaa gaagtctgat cggcgggagc tctatgttat tttgaatcaa
1441 aaaaatgcaa acctgattga agtaaatgaa gaggtcaaga aactttgtgc aacacagttc
1501 aacaacatct tcttcttgga ttgacggatg acggctcacc gagagcata
//