LOCUS BC132746 822 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens ropporin, rhophilin associated protein 1, mRNA (cDNA
clone MGC:164377 IMAGE:40146768), complete cds.
ACCESSION BC132746
VERSION BC132746.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 822)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 822)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: D Column: 8.
FEATURES Location/Qualifiers
source 1..822
/db_xref="H-InvDB:HIT000390799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164377 IMAGE:40146768"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TATGGACA"
gene 1..822
/gene="ROPN1"
/gene_synonym="DKFZp434B1222"
/gene_synonym="ODF6"
/gene_synonym="RHPNAP1"
/gene_synonym="ROPN1A"
/gene_synonym="ropporin"
/db_xref="GeneID:54763"
/db_xref="HGNC:HGNC:17692"
CDS 99..737
/gene="ROPN1"
/gene_synonym="DKFZp434B1222"
/gene_synonym="ODF6"
/gene_synonym="RHPNAP1"
/gene_synonym="ROPN1A"
/gene_synonym="ropporin"
/codon_start=1
/product="ropporin, rhophilin associated protein 1"
/protein_id="AAI32747.1"
/db_xref="GeneID:54763"
/db_xref="HGNC:HGNC:17692"
/translation="MAQTDKPTCIPPELPKMLKEFAKAAIRVQPQDLIQWAADYFEAL
SRGETPPVRERSERVALCNRAELTPELLKILHSQVAGRLIIRAEELAQMWKVVNLPTD
LFNSVMNVGRFTEEIEWLKFLALACSALGVTITKTLKIVCEVLSCDHNGGSPRIPFST
FQFLYTYIAKVDGEISASHVSRMLNYMEQEVIGPDGIITVNDFTQNPRVQLE"
BASE COUNT 215 a 190 c 213 g 204 t
ORIGIN
1 gaggctgggt gacctcctgt ccaggattgc tctcatcgta tgaatcgaag ttttcatctt
61 aacgtatttt tttctcctga gaataggcca accaatcaat ggctcagaca gataagccaa
121 catgcatccc gccggagctg ccgaagatgc tgaaggagtt tgccaaagcc gccattaggg
181 tgcagccgca ggacctcatc cagtgggcag ccgattattt tgaggccctg tcccgtggag
241 agacgcctcc ggtgagagag cggtctgagc gagtcgcttt gtgtaaccgg gcagagctaa
301 cacctgagct gttaaagatc ctgcattctc aggttgctgg cagactgatc atccgtgcag
361 aggagctggc ccagatgtgg aaagtggtga atctcccaac agatctgttt aatagtgtga
421 tgaatgtggg tcgcttcacg gaggagatcg agtggctgaa gtttttagcc cttgcttgca
481 gcgctctggg agttactatt accaaaactc tcaagatagt gtgtgaggtc ttatcatgtg
541 accataatgg tgggtcgccc cggatcccgt tcagcacctt ccagtttctc tacacgtata
601 ttgccaaagt ggatggggag atctctgcat cacatgtcag caggatgcta aactacatgg
661 aacaggaagt aattggccct gatggtataa tcacagtgaa tgactttacc caaaacccca
721 gggttcagct ggagtaaaag cacaattttg gcaattttaa aggaagatac agagatgatt
781 gtacttcaga atgactgaaa cccatatacc acccaaaatc ca
//