LOCUS BC132685 2952 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens inter-alpha (globulin) inhibitor H2, mRNA (cDNA clone
MGC:164316 IMAGE:40146707), complete cds.
ACCESSION BC132685
VERSION BC132685.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: A Column: 19.
FEATURES Location/Qualifiers
source 1..2952
/db_xref="H-InvDB:HIT000390740"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164316 IMAGE:40146707"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTGGCAAC"
gene 1..2952
/gene="ITIH2"
/gene_synonym="H2P"
/gene_synonym="SHAP"
/db_xref="GeneID:3698"
/db_xref="HGNC:HGNC:6167"
/db_xref="MIM:146640"
CDS 50..2890
/gene="ITIH2"
/gene_synonym="H2P"
/gene_synonym="SHAP"
/codon_start=1
/product="inter-alpha (globulin) inhibitor H2"
/protein_id="AAI32686.1"
/db_xref="GeneID:3698"
/db_xref="HGNC:HGNC:6167"
/db_xref="MIM:146640"
/translation="MKRLTCFFICFFLSEVSGFEIPINGLSEFVDYEDLVELAPGKFQ
LVAENRRYQRSLPGESEEMMEEVDQVTLYSYKVQSTITSRMATTMIQSKVVNNSPQPQ
NVVFDVQIPKGAFISNFSMTVDGKTFRSSIKEKTVGRALYAQARAKGKTAGLVRSSAL
DMENFRTEVNVLPGAKVQFELHYQEVKWRKLGSYEHRIYLQPGRLAKHLEVDVWVIEP
QGLRFLHVPDTFEGHFDGVPVISKGQQKAHVSFKPTVAQQRICPSCRETAVDGELVVL
YDVKREEKAGELEVFNGYFVHFFAPDNLDPIPKNILFVIDVSGSMWGVKMKQTVEAMK
TILDDLRAEDHFSVIDFNQNIRTWRNDLISATKTQVADAKRYIEKIQPSGGTNINEAL
LRAIFILNEANNLGLLDPNSVSLIILVSDGDPTVGELKLSKIQKNVKENIQDNISLFS
LGMGFDVDYDFLKRLSNENHGIAQRIYGNQDTSSQLKKFYNQVSTPLLRNVQFNYPHT
SVTDVTQNNFHNYFGGSEIVVAGKFDPAKLDQIESVITATSANTQLVLETLAQMDDLQ
DFLSKDKHADPDFTRKLWAYLTINQLLAERSLAPTAAAKRRITRSILQMSLDHHIVTP
LTSLVIENEAGDERMLADAPPQDPSCCSGALYYGSKVVPDSTPSWANPSPTPVISMLA
QGSQVLESTPPPHVMRVENDPHFIIYLPKSQKNICFNIDSEPGKILNLVSDPESGIVV
NGQLVGAKKPNNGKLSTYFGKLGFYFQSEDIKIEISTETITLSHGSSTFSLSWSDTAQ
VTNQRVQISVKKEKVVTITLDKEMSFSVLLHRVWKKHPVNVDFLGIYIPPTNKFSPKA
HGLIGQFMQEPKIHIFNERPGKDPEKPEASMEVKGQKLIITRGLQKDYRTDLVFGTDV
TCWFVHNSGKGFIDGHYKDYFVPQLYSFLKRP"
BASE COUNT 868 a 685 c 686 g 713 t
ORIGIN
1 cctccccaga ccatctgctt tggggagctt ggcaaaactg tccagcaaaa tgaaaagact
61 cacgtgcttt ttcatctgct tctttctttc tgaagtatca ggcttcgaaa tccccataaa
121 tggactttct gaatttgtag actatgaaga tcttgtggaa ctggccccag gcaaatttca
181 attggtggca gagaaccgga gatatcagag aagccttcca ggagaatcgg aagaaatgat
241 ggaagaggtt gatcaagtaa ctctttatag ctataaagtc cagtctacta ttacttctcg
301 gatggccacc accatgatcc agagcaaagt ggtgaacaat tccccgcagc ctcagaatgt
361 cgtgtttgat gttcagatcc ccaaaggagc attcatttcc aacttctcca tgactgtgga
421 cggcaagaca tttaggagct ctattaagga gaaaactgtg ggccgagctc tttatgcaca
481 ggccagagca aaaggcaaga cggctggctt ggtgaggagc agcgctcttg atatggaaaa
541 cttcagaacg gaagtaaatg tcctcccagg agcaaaggtg cagttcgaac ttcactacca
601 ggaggtgaag tggaggaagc tgggctccta tgagcacagg atctatctgc aacctggacg
661 gctggccaaa cacttagagg tagatgtgtg ggttatcgaa ccacagggac tgagatttct
721 tcatgttccc gacacatttg aaggccattt cgatggtgtt ccggtcattt ctaaaggaca
781 acagaaggcg cacgtctcct tcaagcccac ggtagcacag cagagaatat gccctagctg
841 ccgggagact gcggtagatg gggaactggt ggtgctgtat gacgtgaaaa gagaagagaa
901 ggctggtgaa ctggaggtgt ttaatggata ttttgtccac ttctttgctc ctgacaacct
961 ggacccaatt cccaaaaaca tcctctttgt catcgatgtg agtggctcca tgtggggagt
1021 taaaatgaaa caaactgtgg aagcaatgaa gaccatattg gatgacctca gagcagaaga
1081 ccatttctct gtgattgatt tcaaccagaa cattcgaact tggagaaatg atttaatttc
1141 agctacaaaa acacaggttg cagatgccaa gaggtatatt gagaaaatcc agcccagtgg
1201 aggcacaaac atcaacgaag cactcctacg ggcaatcttc attttgaatg aagccaataa
1261 cttgggactg ttagacccca actccgtctc gctgatcatt ttggtttctg atggagatcc
1321 aacagtgggc gaactaaaac tgtcaaaaat tcagaaaaac gttaaggaga acatccaaga
1381 caatatctcc ttgttcagtt tgggcatggg atttgatgtg gactatgatt ttttgaagag
1441 actgtccaat gaaaaccatg gaattgcaca aaggatttat ggaaaccagg acacgtcttc
1501 ccagcttaag aaattctaca accaggtctc cactccattg ctccggaatg ttcagttcaa
1561 ctatccccat acatcagtca cggacgtcac tcaaaacaat ttccataact actttggagg
1621 ctcagagatt gtggtggcag gaaaatttga ccctgctaaa ttggatcaaa tagagagcgt
1681 tatcacggcg acttcggcta acacgcagtt agtcttggag accctggccc agatggacga
1741 cttgcaggat tttctatcga aagacaagca tgcagatccc gatttcacca ggaaactgtg
1801 ggcctatcta accatcaacc aactgctagc tgaacgaagc ctggctccta cagctgccgc
1861 caagagaaga attacaagat cgatcctgca gatgtctcta gaccaccaca ttgtgactcc
1921 gctgacctcg ctggtgatcg agaacgaggc tggggatgag cgcatgctgg cggatgcccc
1981 accgcaggat ccctcctgct gctcaggggc cctgtattac ggcagcaaag tggttccaga
2041 ttccaccccg tcttgggcca atccttcacc aacgcccgtg atctccatgc tggcacaagg
2101 atctcaggtg ctagagtcca cgccaccccc acatgtgatg agagttgaaa atgacccaca
2161 tttcatcatt tatctaccaa aaagccaaaa gaacatttgt ttcaatattg actcagaacc
2221 tggaaaaatc ctcaacctgg tttctgaccc agaatcagga attgtagtca acggtcagct
2281 tgttggtgcc aagaagccca acaatggaaa actaagcacc tattttggaa aactgggatt
2341 ttatttccaa agtgaagaca taaaaataga aatcagcact gagaccatca ccctgagcca
2401 tggttctagc acattctcct tgtcctggtc cgacacggct caagtcacga atcagagggt
2461 gcagatctca gtgaagaaag aaaaagtggt aactatcacc ctggataaag agatgtcctt
2521 ttctgtttta cttcatcgtg tttggaagaa gcatcccgtc aatgttgact ttctgggaat
2581 ctacataccc cctacaaaca agttctcacc taaagcccac ggactaatag gccagttcat
2641 gcaggaacca aagatacaca tcttcaatga gagaccagga aaggaccctg agaagccaga
2701 ggccagcatg gaagtgaagg ggcagaagct gatcatcacc aggggcttac agaaagacta
2761 cagaacggat ctagtgtttg gaacggacgt tacctgctgg tttgtgcaca acagtggaaa
2821 aggattcatt gacgggcatt acaaggatta cttcgtgcct cagctctaca gctttctcaa
2881 acggccttaa aggtttatag tttgggaaat tatatatatt aatatacatc tttcccctgt
2941 cacttttgca ga
//