LOCUS BC132677 2349 bp mRNA linear HUM 06-DEC-2007 DEFINITION Homo sapiens arachidonate 5-lipoxygenase, mRNA (cDNA clone MGC:164308 IMAGE:40146699), complete cds. ACCESSION BC132677 VERSION BC132677.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2349) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2349) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 9 Row: A Column: 11. FEATURES Location/Qualifiers source 1..2349 /db_xref="H-InvDB:HIT000390732" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:164308 IMAGE:40146699" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: TACCGCTT" gene 1..2349 /gene="ALOX5" /gene_synonym="5-LO" /gene_synonym="5LPG" /gene_synonym="LOG5" /db_xref="GeneID:240" /db_xref="HGNC:HGNC:435" /db_xref="MIM:152390" CDS 68..2092 /gene="ALOX5" /gene_synonym="5-LO" /gene_synonym="5LPG" /gene_synonym="LOG5" /codon_start=1 /product="arachidonate 5-lipoxygenase" /protein_id="AAI32678.1" /db_xref="GeneID:240" /db_xref="HGNC:HGNC:435" /db_xref="MIM:152390" /translation="MPSYTVTVATGSQWFAGTDDYIYLSLVGSAGCSEKHLLDKPFYN DFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR WITGDVEVVLRDGRAKLARDDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKC HKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVKISNT ISERVMNHWQEDLMFGYQFLNGCNPVLIRRCTELPEKLPVTTEMVECSLERQLSLEQE VQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD ENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHP IFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLC FPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQD FVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIP NAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEE HFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI" BASE COUNT 532 a 700 c 646 g 471 t ORIGIN 1 gctagatgcg gacacctgga ccgccgcgcc gaggctcccg gcgctcgctg ctcccgcggc 61 ccgcgccatg ccctcctaca cggtcaccgt ggccactggc agccagtggt tcgccggcac 121 tgacgactac atctacctca gcctcgtggg ctcggcgggc tgcagcgaga agcacctgct 181 ggacaagccc ttctacaacg acttcgagcg tggcgcggtg gattcatacg acgtgactgt 241 ggacgaggaa ctgggcgaga tccagctggt cagaatcgag aagcgcaagt actggctgaa 301 tgacgactgg tacctgaagt acatcacgct gaagacgccc cacggggact acatcgagtt 361 cccctgctac cgctggatca ccggcgatgt cgaggttgtc ctgagggatg gacgcgcaaa 421 gttggcccga gatgaccaaa ttcacattct caagcaacac cgacgtaaag aactggaaac 481 acggcaaaaa caatatcgat ggatggagtg gaaccctggc ttccccttga gcatcgatgc 541 caaatgccac aaggatttac cccgtgatat ccagtttgat agtgaaaaag gagtggactt 601 tgttctgaat tactccaaag cgatggagaa cctgttcatc aaccgcttca tgcacatgtt 661 ccagtcttct tggaatgact tcgccgactt tgagaaaatc tttgtcaaga tcagcaacac 721 tatttctgag cgggtcatga atcactggca ggaagacctg atgtttggct accagttcct 781 gaatggctgc aaccctgtgt tgatccggcg ctgcacagag ctgcccgaga agctcccggt 841 gaccacggag atggtagagt gcagcctgga gcggcagctc agcttggagc aggaggtcca 901 gcaagggaac attttcatcg tggactttga gctgctggat ggcatcgatg ccaacaaaac 961 agacccctgc acactccagt tcctggccgc tcccatctgc ttgctgtata agaacctggc 1021 caacaagatt gtccccattg ccatccagct caaccaaatc ccgggagatg agaaccctat 1081 tttcctccct tcggatgcaa aatacgactg gcttttggcc aaaatctggg tgcgttccag 1141 tgacttccac gtccaccaga ccatcaccca ccttctgcga acacatctgg tgtctgaggt 1201 ttttggcatt gcaatgtacc gccagctgcc tgctgtgcac cccattttca agctgctggt 1261 ggcacacgtg agattcacca ttgcaatcaa caccaaggcc cgtgagcagc tcatctgcga 1321 gtgtggcctc tttgacaagg ccaacgccac agggggcggt gggcacgtgc agatggtgca 1381 gagggccatg aaggacctga cctatgcctc cctgtgcttt cccgaggcca tcaaggcccg 1441 gggcatggag agcaaagaag acatccccta ctacttctac cgggacgacg ggctcctggt 1501 gtgggaagcc atcaggacgt tcacggccga ggtggtagac atctactacg agggcgacca 1561 ggtggtggag gaggacccgg agctgcagga cttcgtgaac gatgtctacg tgtacggcat 1621 gcggggccgc aagtcctcag gcttccccaa gtcggtcaag agccgggagc agctgtcgga 1681 gtacctgacc gtggtgatct tcaccgcctc cgcccagcac gccgcggtca acttcggcca 1741 gtacgactgg tgctcctgga tccccaatgc gcccccaacc atgcgagccc cgccaccgac 1801 tgccaagggc gtggtgacca ttgagcagat cgtggacacg ctgcccgacc gcggccgctc 1861 ctgctggcat ctgggtgcag tgtgggcgct gagccagttc caggaaaacg agctgttcct 1921 gggcatgtac ccagaagagc attttatcga gaagcctgtg aaggaagcca tggcccgatt 1981 ccgcaagaac ctcgaggcca ttgtcagcgt gattgctgag cgcaacaaga agaagcagct 2041 gccatattac tacttgtccc cagaccggat tccgaacagt gtggccatct gagcacactg 2101 ccagtctcac tgtgggaagg ccagctgccc cagccagatg gactccagcc tgcctggcag 2161 gctgtctggc caggcctctt ggcagtcaca tctcttcctc cgaggccagt acctttccat 2221 ttattctttg atcttcaggg aactgcatag attgatcaaa gtgtaaacac catagggacc 2281 cattctacac agagcaggac tgcacagcgt cctgtccaca cccagctcag catttccaca 2341 ccaagcagc //