LOCUS BC131821 3329 bp mRNA linear HUM 30-JAN-2007
DEFINITION Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:40126801),
complete cds.
ACCESSION BC131821
VERSION BC131821.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: p Column: 24
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3329
/db_xref="H-InvDB:HIT000390713"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40126801"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGATACTT sequenced from the reverse primer"
gene 1..3329
/gene="FRAS1"
/db_xref="GeneID:80144"
/db_xref="HGNC:HGNC:19185"
/db_xref="MIM:607830"
CDS 31..984
/gene="FRAS1"
/codon_start=1
/product="FRAS1 protein"
/protein_id="AAI31822.1"
/db_xref="GeneID:80144"
/db_xref="HGNC:HGNC:19185"
/db_xref="MIM:607830"
/translation="MGVLKVWLGLALALAEFAVLPHHSEGACVYQGSLLADATIWKPD
SCQSCRCHGDIVICKPAVCRNPQCAFEKGEVLQIAANQCCPECVLRTPGSCHHEKKIH
EHGTEWASSPCSVCSCNHGEVRCTPQPCPPLSCGHQELAFIPEGSCCPVCVGLGKPCS
YEGHVFQDGEDWRLSRCAKCLCRNGVAQCFTAQCQPLFCNQDETVVRVPGKCCPQCSA
RSCSAAGQVYEHGEQWSENACTTCICDRGEVRCHKQACLPLRCGKGQSRARRHGQCCE
ECVSPALASQSVGIAGMSHHAQSLLGPFLTQIKKPHFSCLE"
BASE COUNT 896 a 649 c 780 g 1004 t
ORIGIN
1 ggctcctcca tcgtgggtgc cgaggcggcg atgggtgtcc tcaaagtgtg gctcgggctg
61 gccctagcgt tggcggaatt tgcagtattg cctcatcatt ccgaaggtgc ttgtgtctat
121 cagggttcct tgttggcgga tgccacaatt tggaagcccg attcatgcca gagctgccgt
181 tgccatggtg atattgttat ctgcaaacct gctgtttgca gaaaccctca atgtgccttt
241 gagaagggag aagtgcttca aatagctgcc aaccaatgct gtcctgagtg tgttttgagg
301 actccaggat cttgccatca tgaaaagaaa atccatgagc atgggacaga atgggcctct
361 tctccatgta gtgtgtgctc ttgcaatcat ggggaagtcc gatgtacccc ccaaccatgc
421 ccaccgctgt catgtggaca ccaggagctg gcattcatcc ctgaaggaag ctgctgccca
481 gtttgtgtgg gccttgggaa accctgttcc tatgaaggcc atgtgtttca ggatggggag
541 gactggcggc tgagccggtg tgccaaatgt ctgtgtagaa atggggttgc ccagtgcttc
601 acagctcagt gtcagcctct attttgtaac caggatgaga ctgtagtccg agtccctgga
661 aaatgttgcc cgcagtgctc tgcaagatcc tgctctgcag ctggccaagt atacgagcat
721 ggtgagcagt ggagcgaaaa tgcctgcacc acgtgtatat gtgaccgggg tgaggtcagg
781 tgtcacaagc aggcctgcct gcccctgaga tgcggaaagg gtcagagcag ggctcggcgt
841 catgggcaat gctgtgagga atgtgtgtct cctgccttgg cctcccaaag tgttgggatt
901 gcaggcatga gccaccatgc ccagtcacta cttgggccat ttttgactca aataaagaag
961 ccacatttct cctgtttaga gtgataaatt taagaaaaaa gtaaaaattg gaaggaattt
1021 tagccgttcc ttctggaaac cctgaactgt atagcctaat gattattggg tcactggccg
1081 cttagacctc tctcagtttc tgttgcctag aggaataaaa tctgaggggt aaaatttaag
1141 aaaattcatg ttattgaaga aaaaaaaatg gtgttgagct cttctttcaa atgaattcta
1201 ataaatatga cactgtctat aattcaggaa gttaatagcc ttttaatttt ggatctgatt
1261 tttgcaaagg gtcatggaga agggaagggg aaagcctgtt gccttcagat ctgctagctg
1321 cacttttctg tgttgatgta tatccaggca atgtttgaag acacaagggt tttcttggtc
1381 tcctctctct agaataacat tgtgatgaca atttcaaatc aatcagttag actcaaatta
1441 aaatcaagta aaaaacaaga catctatcat ttagatattg cttactcttc ccctgggcct
1501 tttgcagtgt ttggggttgg gatgagagga gtaatctgag ccagcatttt ctgtggagct
1561 ctgaatggta actgggcatc tcggtacctg aatggtggta cccaagcgcc tcagtgcctg
1621 aatcccacct gagcatcata gtatctgaat ggtacctgag ctctgaatgg tcctggagca
1681 tcacaatagc cctggtgctc tatcccaggg gctgggctct gacccatgca gaggttccct
1741 taagaaactg ggaggtccaa tgaaaacatg ctgcaaatgt ttcttcgatt aaaagataca
1801 cagttaacac tacagatgtt tttagattaa aagatatgca tttaacattt tcttatgtag
1861 tgaaagaggg ttcctcatgc aggatatgcc agatagaatg gttttgaaac tagctggagc
1921 ttaaggtaga atctctgctt ctgtattgtc acttgcccta gtaacagaag ttatgatcag
1981 agactcctaa taaaacaacc agtggttcta tgttatataa attattgtaa gtttttttgc
2041 atattatctc atttgattcc ttttggaaat ggcagggcag gtatatccat ttatagatga
2101 gaaatagtca gtgaggaaac ggatctgacc caggccttcc aattcctggt cttgtgctta
2161 tcccactctc ccaactttat cctcaaatac attttctttt ttttgccgaa aatgatacct
2221 tgttttctag ttcagcctag taagcaggaa ttgatagatc aaggtaaaaa tcctctcttg
2281 atgttgatgc aggtgatcgt tttggccctg aaactgccag tgacctagag gcatcatttc
2341 ctattcaaga cgtcctggaa aactacattt actactttca gagtgttcat gaaagcattg
2401 agccaaccca tgatattttt agtttttatg tgagtgatgg aaccagtcgt tcagaaattc
2461 acagcatcaa tatcaccatt gaggtaaaga ctttggaagt tggaaaggtt gagcccttga
2521 ccacaatatt tcacaccatt agagagcttt ctttataggg actcaaaagc aaagaagatt
2581 ggatttgacc ttcaaaattg aaggtcgttc ttaaaatata gccttcagga atcttgtaga
2641 attaaggttg gcatttgggg aaggcttgag ttagaaatct aaatttccat ttcaggattg
2701 aatttatttg ttcggtgtga aaaacagttt gtgaaggtca gagatgcttt gccagtctca
2761 tatataaatg aaaacttaca tatgtctatg tttctctgaa attgtgtttg gttctatatg
2821 catatttgcc ttttcttatt ttactgcatt tatttattta attgtaacat caaagaaatg
2881 tgttccttga tgctgtattt attctcattt gagcaactac acaggcttgc tctaccgaga
2941 gagagacaca ggggagggga aagataaatc tcagaatgaa ataccctctg ccttgggaaa
3001 ataaaatgta aagaaccctc tgcactctta agggtcagtg gtggaaaggg gctggcacca
3061 gggcagggag acagctttag agacccacac tttcaaatat agtgtccttc tacaggtact
3121 gtggtatgct tagcattttc taagagagtt ctgagttata ttagtatggt cttttatctt
3181 caaagtatgt taatacttgt acttgtcaaa gcacatatcc atatttttgg tctagaaaat
3241 atggtcattg tacttacgga agatatctga gaaaactttt atgaaatgtc catcagcttc
3301 ttttgaaggg ggcattttgt tgcctggac
//