LOCUS BC131725 3468 bp mRNA linear HUM 30-JAN-2007
DEFINITION Homo sapiens dpy-19-like 3 (C. elegans), mRNA (cDNA clone
MGC:150647 IMAGE:40123868), complete cds.
ACCESSION BC131725
VERSION BC131725.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3468)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3468)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: o Column: 15.
FEATURES Location/Qualifiers
source 1..3468
/db_xref="H-InvDB:HIT000390627"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:150647 IMAGE:40123868"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TTTTCATC sequenced from the reverse primer"
gene 1..3468
/gene="DPY19L3"
/db_xref="GeneID:147991"
/db_xref="HGNC:HGNC:27120"
CDS 47..2197
/gene="DPY19L3"
/codon_start=1
/product="dpy-19-like 3 (C. elegans)"
/protein_id="AAI31726.1"
/db_xref="GeneID:147991"
/db_xref="HGNC:HGNC:27120"
/translation="MMSIRQRREIRATEVSEDFPAQEENVKLENKLPSGCTSRRLWKI
LSLTIGGTIALCIGLLTSVYLATLHENDLWFSNIKEVEREISFRTECGLYYSYYKQML
QAPTLVQGFHGLIYDNKTESMKTINLLQRMNIYQEVFLSILYRVLPIQKYLEPVYFYI
YTLFGLQAIYVTALYITSWLLSGTWLSGLLAAFWYVTNRIDTTRVEFTIPLRENWALP
FFAIQIAAITYFLRPNLQPLSERLTLLAIFISTFLFSLTWQFNQFMMLMQALVLFTLD
SLDMLPAVKATWLYGIQITSLLLVCILQFFNSMILGSLLISFNLSVFIARKLQKNLKT
GSFLNRLGKLLLHLFMVLCLTLFLNNIIKKILNLKSDEHIFKFLKAKFGLGATRDFDA
NLYLCEEAFGLLPFNTFGRLSDTLLFYAYIFVLSITVIVAFVVAFHNLSDSTNQQSVG
KMEKGTVDLKPETAYNLIHTILFGFLALSTMRMKYLWTSHMCVFASFGLCSPEIWELL
LKSVHLYNPKRICIMRYSVPILILLYLCYKFWPGMMDELSELREFYDPDTVELMNWIN
SNTPRKAVFAGSMQLLAGVKLCTGRTLTNHPHYEDSSLRERTRAVYQIYAKRAPEEVH
ALLRSFGTDYVILEDSICYERRHRRGCRLRDLLDIANGHMMDGPGENDPDLKPADHPR
FCEEIKRNLPPYVAYFTRVFQNKTFHVYKLSRNK"
BASE COUNT 1011 a 666 c 691 g 1100 t
ORIGIN
1 ggcgcgtagg agtgatttgg agaacaatgc atgtaagtct gacatcatga tgtccatccg
61 gcaaagaaga gaaataagag ccacagaagt ttctgaagac tttccagccc aagaagaaaa
121 tgtgaagttg gaaaataaat tgccatctgg ttgtaccagt agaagattat ggaagatttt
181 gtcattgaca attggtggaa ccattgccct ttgcattgga cttcttacat ctgtctacct
241 tgccacgtta catgaaaatg atttatggtt ttctaatatt aaggaagtgg agcgagaaat
301 ctcattcaga acagagtgtg gcctgtatta ctcctactac aagcagatgc tgcaggctcc
361 aaccctcgtg caaggttttc atggcctaat atatgataat aaaactgaat ctatgaagac
421 aattaacctc cttcagcgaa tgaatattta ccaagaggtt tttctcagta ttttatatag
481 agttctaccc atacagaaat atttagagcc agtttatttt tatatttaca ccttatttgg
541 gctccaggcg atctatgtca cagctctcta cataaccagc tggctactca gtggtacatg
601 gctgtcagga ctgttggcag ctttctggta tgtcacaaat agaatagata ccacaagagt
661 tgagtttacc atcccactga gggagaactg ggcactgcca ttctttgcaa ttcagatagc
721 agcaattaca tatttcctga gaccaaactt acagcctctt tctgaaaggc tgacacttct
781 tgccattttc atatcaactt ttctctttag tctgacatgg caatttaatc aatttatgat
841 gctgatgcaa gcattagtgc tgttcacact ggactccctg gacatgctgc cagcagtgaa
901 ggcgacatgg ctgtatggaa tacagataac aagtttactc ctggtctgca ttcttcagtt
961 ttttaattcc atgattcttg gatcactgct tatcagtttt aacctttcag tattcattgc
1021 aagaaaactt cagaaaaatc tgaaaactgg aagcttcctt aataggcttg ggaaactttt
1081 gttacattta tttatggttt tatgtttgac actttttctc aacaacataa ttaagaaaat
1141 tcttaacctg aagtcagatg aacacatatt taaatttctg aaggcaaaat ttgggcttgg
1201 agcaacaagg gattttgatg caaatctcta tctgtgtgaa gaagcttttg gcctcctgcc
1261 ttttaataca tttggaaggc tttcagatac tctgcttttt tatgcttaca tattcgttct
1321 gtccatcaca gtgattgtag cattcgttgt tgcctttcat aatctcagtg attctacaaa
1381 tcaacaatcc gtgggtaaaa tggaaaaagg cacagttgac ctgaaaccag aaactgccta
1441 caacttaata cataccattc tgtttggatt cttggcattg agtacaatga gaatgaagta
1501 cctctggacg tcacacatgt gtgtgttcgc atcattcggc ctatgtagcc ctgaaatatg
1561 ggagttactt ctgaagtcag tccatcttta taacccaaag aggatatgta taatgcgata
1621 ttcagtaccg atattaatac tgctgtatct atgctataag ttctggccag gaatgatgga
1681 tgaactctcc gagttgagag aattctatga tccagataca gtggagctga tgaactggat
1741 taactctaac actccaagaa aggctgtgtt tgcgggaagc atgcagttgc tggccggagt
1801 caagctgtgc acgggaagga ccctaaccaa ccacccgcac tatgaagaca gcagcctgag
1861 agagcggacc agagcggttt atcagatata tgccaagagg gcaccagagg aagtgcatgc
1921 cctcctaagg tccttcggca ctgactacgt aatcctggaa gacagcatct gctacgagcg
1981 gaggcaccgc cggggctgcc gactccggga cctgctggac attgccaacg gccacatgat
2041 ggatggccca ggagagaatg atcctgattt gaaacctgca gaccaccctc gcttctgtga
2101 agagatcaaa agaaacctgc ctccctacgt ggcctacttc accagagtgt tccagaacaa
2161 aaccttccac gtttacaagc tgtccagaaa caagtagcgc agatttctgc ccagtgtcta
2221 tttttgatac ggagaaactg catcatgatg aaactcaata gatgacgttt cctatgtaag
2281 taggtagccc aaaccttcaa gctgtgatat gagtaagttc tacagatgtt tacacaagtg
2341 ttgccatctt tgaaagcatc ttctacaagc agaagtcttt ttcgttgtgt gtctatcttt
2401 ctcattaatg ttctttagcc taaatgttaa caactttcta agagtgacct agaattatgt
2461 tgttggagag aatgatgtgt gttccatgga tacctggata ggcacataac atgttggaag
2521 atgagcacct gctcaggatt tgaaatacgt ttaattttca ggtgacttaa gacagctatg
2581 attgaatcaa ctagagatga tgatcgactt atttaatatg atttcactgg tgaagaccaa
2641 ttggtagctt tttaaaaagc actttagtgt cctgttttac cttaaaatgt tataatattt
2701 tccagttgtc atgctgtcaa cattaacaaa aaaaatcatg ttaaggcttt gtatcaaaca
2761 ttttgttaca ctctgtctga aatgtaatgt ggagtacttc agcagtatgt gtcatgtatt
2821 gtgtgtgtct gtgtgtgtgc atgtgcacac atgtgtttta atgctgggca cagaaaagtg
2881 ttacaagttc catatcgtaa gtccttaaag gggcagaaat atatgtagcc aagtagaatt
2941 tattacattt tagtgttatt attttaaaac ttactgatac tctttaacct ctcctgcagt
3001 aatagttttg ctttatttct tactcatttc aatttattgg gtttgcaaaa ttttgtaaac
3061 tttttgtgtt tttagccttt gtatttttta cagcctagaa tcttgcaaag tctgaatatt
3121 ttttaaatgt tctatcttaa ctagttcact aatacagtat ttttagcaga cagcattttc
3181 agacagcatt ttcataccaa gtttgacttg tggtctccaa tcttactggg aaggccctgg
3241 tagtgtaatt cttttcctta ttaaaaggta accaagtgcc tctaagtcat gcttatttgt
3301 aaacaacaaa gaagagtata tgtacctgct caaaattttt ttgataattg cttatataat
3361 taatttctaa tgatgaggac atgtaaaagt tgccagtaag aacatagtat gcatttaatt
3421 aaatcaagat ggctaatgga attaactttc tcccctgttc ttgccagg
//