LOCUS BC131724 2569 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens calcyphosine 2, mRNA (cDNA clone IMAGE:40123769),
complete cds.
ACCESSION BC131724
VERSION BC131724.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2569)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: o Column: 14
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2569
/db_xref="H-InvDB:HIT000390626"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40123769"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TTCCCTTT sequenced from the reverse primer"
gene 1..2569
/gene="CAPS2"
/gene_synonym="UG0636c06"
/db_xref="GeneID:84698"
/db_xref="HGNC:HGNC:16471"
/db_xref="MIM:607724"
CDS 730..1344
/gene="CAPS2"
/gene_synonym="UG0636c06"
/codon_start=1
/product="CAPS2 protein"
/protein_id="AAI31725.1"
/db_xref="GeneID:84698"
/db_xref="HGNC:HGNC:16471"
/db_xref="MIM:607724"
/translation="MEQEDDIIIQETNDRLVFKAIQDVLKEKLHKRGVRILTGLGKYF
QQLDKEGNGLLDKADFKQALKVFHLEVSEKDFESAWLILNDNGNGKVDYGEFKRGIIG
EMNEYRKSYVRKAFMKLDFNKSGSVPIINIRKCYCAKKHSQVISGHSTEEEIKSSFLE
TLKVACSKSDEVSYGEFEDYYEGLSIGIVDDEDFVNILRTPWGI"
BASE COUNT 906 a 370 c 470 g 823 t
ORIGIN
1 ggggagagga ggggaaagct agacctgcag agtgaagaaa gctggtaata gatgtctgac
61 aaactaaaga aagacttgtg ttacgatcag aacataatac ctgaaaattt tccagcacca
121 acagacaaat gtaaactaaa atatcagcaa tgtaaaactg aaattaaaga gggctataag
181 cagtatagtc agagaaatgc agaaaataca aaatcaaatg ttacacataa acagtctcca
241 agaaacaaga tagatgaaaa gtgtgtgcaa gatgaagaag ccaacacaga tgaccttacg
301 actctggata ggaaagccat cttacagcaa ggttatgcag acaactcttg cgataaacaa
361 cagagggcaa gaaaattgga tgcagtaagt tgtcagcatt tttacttatt tggaaattgt
421 ggctgcagag aagaagaaac agattgttgc agagcaagtg atgatagacc acttatctag
481 ggctgtcatc agtgatccag agcaaaattt agccattgag caaaaagaaa gtgatcatat
541 ccttccagat tcaaagatga cacctcttcg atttagaaaa agaacactac atgaaacaaa
601 ggtgcaacct tgacattttt gagttctgat catctcagcc ttccagaaag catcaaagaa
661 aacacattac ttaaactccg aatcacaaat attgatcaaa tagctttgga ttctctcaaa
721 actgcttcta tggaacagga ggatgatata atcattcaag aaaccaatga taggctggtc
781 ttcaaagcaa ttcaagatgt gctaaaagaa aaactacata aaagaggtgt tcgtattttg
841 actggattgg gaaaatattt tcaacagttg gacaaggaag gaaatggact tttagataag
901 gcagatttta agcaagctct aaaagtgttt cacttagaag tgtctgaaaa ggattttgag
961 tctgcatggc taattctgaa tgacaatggc aatggcaagg ttgattatgg agaattcaaa
1021 cgtggtatta ttggtgaaat gaatgaatac aggaaatcat atgttcgaaa ggcctttatg
1081 aaactggatt tcaacaaaag tggcagtgtg cctattataa acataagaaa atgttactgt
1141 gcaaagaagc attctcaagt aatttcaggc cattcaacag aggaagaaat caaatcatcc
1201 tttctagaaa cattaaaagt tgcctgcagc aagtctgatg aagtgtcata tggtgaattt
1261 gaagattact atgaaggttt aagtatagga atagtagatg atgaagactt tgttaacatc
1321 ttacgtactc catgggggat ttagtcttta ataatacata tgtcatcaac actaagcatt
1381 ttattggaga gatgatatca atgtaaagga tgatcaaaca ctggaatata ttttcctagg
1441 acttccttta ttctggtttc ttgtttgttt gttttgtttt gttttgtttt ctcaaaaatg
1501 ttgaatttgg aaagagaact atccagaaag atagatgtag gggtgtgtta gtgtttgtgc
1561 atgtgtatgc ctgttcacat gtccttacat ttgtaaagat atctttttgg tttattactt
1621 atcttgcgta tattttagag gtcatttttt attaacttca gtaggaaagt tacatctgca
1681 tcaaacaata tggcaacatc tatttattaa ccaagtttcc tgtcctttca cattgttttt
1741 tgctacctct tcctcagaat atatttgcca ccatggtcaa tttgataaat tagaattggg
1801 cccaaagcca gtgagataat tcaatgtgtt tttaacacat gaaaatatta aaggatatgc
1861 aagagaaatt tttcaagcag tgtgattata gatgttttct gtatatagaa tatttcaaat
1921 gatggaggtt taccccatga tgctcattta aatactgact tgtcttttaa atctgtcttc
1981 taaattatgt actgttgttg gttaaataga gcacaatgta gttattctaa tgcccagttg
2041 tatttgttct tttattctgc tttttaactg taatcctttt taccagcata cgattgttat
2101 tgagcaatat gaaagggaaa tgttctttat taaaatcaat acattatctt attaaacaaa
2161 gatcctaaaa gtatattgtt gcatatatga atccaaggaa tagttcagta attattgcct
2221 aaaatgtgaa agcatatttt gtatcctaaa atgaatgtat gatattctaa acatctgttt
2281 tagtataaca aacaattgaa acatttcctt ctaaatatat gttatttaat agttacatgt
2341 attataatca ttctttctaa attctttgct agtcatttct tcctgggaat acagagaaaa
2401 gagacaactt tatgagttgt tttcaacttc ataattttaa attttctatg ttaatataac
2461 ataaattaga aaaaataagt gattcaaaat gaaaatattt actttgtaga atatgacttt
2521 agacatatca ctgtatccat ctatacttgg cagcaacatg agaagtgtg
//