LOCUS BC131712 2018 bp mRNA linear HTC 28-FEB-2007
DEFINITION Homo sapiens eomesodermin homolog (Xenopus laevis), mRNA (cDNA
clone IMAGE:40122393), with apparent retained intron.
ACCESSION BC131712
VERSION BC131712.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: n Column: 18
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2018
/db_xref="H-InvDB:HIT000390614"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40122393"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTTCTCTA sequenced from
the forward primer"
BASE COUNT 492 a 585 c 492 g 449 t
ORIGIN
1 aacaatgcag ttaggggagc agctcttggt gagctcagtg aacctgcctg gcgcgcactt
61 ctacccgccg ccgcggctgc ggccactgcg cgctactcca tggacagcct gagctccgag
121 cggtactacc tccagtcccc cggtcctcag gggtcggagc tggctgcgcc ctgctcactc
181 ttcccgtacc aggcggcggc tggggcgccc cacggacctg tgtacccggc tcctaacggg
241 gcgcgctacc cctacggctc catgctgccc cccggcggct tccccgcggc tgtgtgccca
301 cccgggaggg cgcagttcgg cccaggagcc ggtgcgggca gtggcgcggg cggtagcagc
361 ggcgggggcg gcggcccggg cacctatcag tacagccagg gggctccgct ctacgggccg
421 taccctggag ccgcagcggc gggatcttgc ggaggactgg ggggcctggg ggttccaggt
481 tctggcttcc gtgcccacgt ctacctgtgc aaccggcctc tgtggctcaa attccaccgc
541 caccaaactg agatgatcat tacgaaacag ggcaggcgca tgtttccttt cttgagcttc
601 aacataaacg gactcaatcc cactgcccac tacaatgtgt tcgtagaggt ggtgctggcg
661 gaccccaacc actggcgctt ccaggggggc aaatgggtga cctgtggcaa agccgacaat
721 aacatgcagg gcaacaaaat gtatgttcac ccagagtctc ctaatactgg ttcccactgg
781 atgagacagg agatttcatt cgggaaatta aaactcacca ataacaaagg cgcaaataac
841 aacaacaccc agatgatagt cttacaatcc ttacacaaat accaaccccg actgcatatt
901 gttgaagtta cagaggatgg cgtggaggac ttgaatgagc cctcaaagac ccagactttt
961 accttctcag aaacgcaatt cattgcagtg actgcctacc aaaacaccga tgtgagtgtc
1021 ccagacatct caagaatctc taaagctaag gtccagcatg ataaatcact caatgactgt
1081 ttttctcccc tatctagatt actcaactaa agattgatca taaccccttt gcaaaaggct
1141 tcagagacaa ctatgattcc atgtacaccg cttcagaaaa tgacaggtta actccatctc
1201 ccacggattc tcctagatcc catcagattg tccctggagg tcggtacggc gttcaatcct
1261 tcttcccgga gccctttgtc aacactttac ctcaagcccg ctattataat ggcgagagaa
1321 ccgtgccaca gaccaacggc ctcctttcac cccaacagag cgaagaggtg gccaaccctc
1381 cccagcggtg gcttgtcacg cctgtccagc aacctgggac caacaaacta gacatcagtt
1441 cctatgaatc tgaatatact tctagcacat tgctcccata tggcattaaa tccttgcccc
1501 ttcagacatc ccatgccctg gggtattacc cagacccaac ctttcctgca atggcagggt
1561 ggggaggtcg aggttcttac cagaggaaga tggcagctgg actaccatgg acctccagaa
1621 caagccccac tgtgttctct gaagatcagc tctccaagga gaaagtgaaa gaggaaattg
1681 gctcttcttg gatagagaca cccccttcca tcaaatctct agattccaat gattcaggag
1741 tatacaccag tgcttgtaag cgaaggcggc tgtctcctag caactccagt aatgaaaatt
1801 caccctccat aaagtgtgag gacattaatg ctgaagagta tagtaaagac acctcaaaag
1861 gcatgggagg gtattatgct ttttacacaa ctccctaaag agttatttta acctcaaaaa
1921 ttagctaact ttttgcagat ggacttggtg gtgttttttg ttgtcttctt tgcctaggtt
1981 gccaaaaaga tgtttgcctt ccaccttgat gcatcctg
//