LOCUS BC131628 3243 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens BEN domain containing 3, mRNA (cDNA clone MGC:149812
IMAGE:40118705), complete cds.
ACCESSION BC131628
VERSION BC131628.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3243)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3243)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: k Column: 11.
FEATURES Location/Qualifiers
source 1..3243
/db_xref="H-InvDB:HIT000390589"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149812 IMAGE:40118705"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..3243
/gene="BEND3"
/gene_synonym="RP11-59I9.2"
/db_xref="GeneID:57673"
/db_xref="HGNC:HGNC:23040"
CDS 651..3137
/gene="BEND3"
/gene_synonym="RP11-59I9.2"
/codon_start=1
/product="BEN domain containing 3"
/protein_id="AAI31629.1"
/db_xref="GeneID:57673"
/db_xref="HGNC:HGNC:23040"
/translation="MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSV
DSVLTALQDSSKRKQLVSDGLLDSVPGVKRRRLIPEALLAGMRNRENSSPCQGNGEQA
GRGRSLGNVWPGEEEPCNDATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKAN
ASNSPSSLRLLNEPQKRDCGSTGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVD
LLSLEVSRIKKQVSPTEMVAKFQPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFP
ELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLND
FFSRFWAQREMEDSQPSGQVASFFEAEQVDPGHFLDNKDQEEALSLDRSSTIASDHVV
DTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQI
IRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLDAGSEGDPPRDDCYDSSSLPDDI
SVVKVEDSFEGERPGRRSKKIWLVPIDFDKLEIPQPDFEVPGADCLLSKEQLRSIYES
SLSIGNFASRLLVHLFPELFTHENLRKQYSCSGSLGKKQLDPSRIKLIRHYVQLLYPR
AKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKVHVPGPECRDLTSYAINPERFRE
EFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFA
ARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWH
YECIPSIDERCRRPNRKKCDILKKAKKVEK"
BASE COUNT 715 a 984 c 947 g 597 t
ORIGIN
1 atgggccccg ccgccagggg gcgcagcgct cccttcccgg ccgttccacg gcggttcgcg
61 gttcccgctg cccaggagct ggaggcgggc ccggcgcctt gggtgtgcac ccgggctggc
121 gcgaggcctg gccggccggc cgcaaagctg aagcctgggg cgctcgccgc tcctcgtgag
181 cgctcctttc cttctctatg ataaacgtga tttcccacgc atgctttgcc cttgcctcat
241 ccgtgagctg tgcaccaccg atttggaggc ccttgtgtgc ttgtttacct acgtctccct
301 atgtagctat tttaaacaag gtgtttttac agagataaaa gttttattga ttgctcaggt
361 ggtctttctg gaagaattct gcacgtaaac gctaactcga caagagtgcc gggaggaaca
421 aggttactca ctagagttgg aaatgtgcag ttcatctcct taaagtaact tttgaatggt
481 tgaatacaaa tagtaaacat gccacagggc agcgtggcat agtgccagaa agctacggtt
541 gcaggaaact gaggtttaat ttttagaagt caatgtcacc tgtagcagag aagttccttg
601 aaatcaaatc agacatatgg caattgtgaa aagattgaac ggaatagaag atgaactcaa
661 ctgaattcac cgaagatgta gaagaagttc taaaaagtat cactgtgaaa gtggagacag
721 aggctgaaga tgctgctctg gactgctccg tgaattccag gacttctgag aagcactctg
781 tggacagcgt cctcactgcc ctgcaggact ccagcaaacg aaagcagctg gtcagcgatg
841 gcctgctaga ctctgtcccc ggcgtgaaga ggaggcggct gatccccgag gctctcctag
901 caggcatgcg gaaccgtgag aacagctcgc cctgccaagg caatggtgag caggccggca
961 ggggcaggag cctgggcaat gtgtggcctg gagaggagga gccctgcaac gatgccacca
1021 ccccttccta caagaagcct ctgtatggca tctcgcacaa gatcatggag aagaagaatc
1081 ctccctcggg ggacctgcta aacgtgtacg agctctttga gaaggcaaac gccagcaaca
1141 gcccctcgtc actgcggctc ctgaatgagc cacagaagcg ggactgtggc agcaccgggg
1201 caggcactga caacgacccc aacatctact tcctgatcca gaagatgttc tacatgctga
1261 acaccctcac gtccaacatg tcccagctgc acagcaaggt ggacctgctc tcccttgagg
1321 tgagccgcat caagaagcag gtgagcccca ctgagatggt ggccaaattc cagccgcccc
1381 ctgagtacca gctcacagcc gcagagctca agcagatcgt ggaccagagc ctgtcagggg
1441 gggacctggc ctgccgcttg ctggtgcagc tcttccccga gctcttcagc gacgtggact
1501 tctcccgggg ctgcagtgcc tgtggctttg cggccaagcg caagctggag tcgctgcacc
1561 tgcagctcat ccgcaactat gtggaggtct actacccctc ggtgaaggac acggctgtgt
1621 ggcaggccga gtgcctgccc cagctgaacg acttcttcag ccgcttctgg gcccagcggg
1681 aaatggagga cagccagccc agcggccagg tcgccagctt ctttgaggca gagcaggtgg
1741 accccggcca cttcctggac aacaaagacc aggaggaggc cctgtctctt gaccggagca
1801 gcaccatcgc ctcagaccac gtggtggaca cgcaggacct cactgagttc ctggacgaag
1861 cctcctcacc aggcgagttt gccgtcttcc tcctccaccg gctcttcccc gagctcttcg
1921 accaccgcaa gctgggtgaa cagtacagct gctacgggga cggtggaaag caggagctgg
1981 acccgcagcg gctgcagatc atccgcaact acacggagat ctacttccct gacatgcagg
2041 aggaggaggc ctggctgcag cagtgtgccc agcgcatcaa cgacgagctc gagggcctgg
2101 ggctggacgc gggcagtgaa ggcgaccccc cgcgtgatga ctgctacgac tcctccagtc
2161 tgcccgacga catctcagtg gtcaaggtgg aggacagctt cgagggcgag cggccgggtc
2221 gccgctccaa gaagatctgg ctggtgccca tcgacttcga caagttagag atcccccagc
2281 ctgacttcga ggtgcccggt gccgactgcc tgctcagcaa ggagcagcta cgcagcatct
2341 acgagagcag cctgtccatc ggcaacttcg cctcgcgcct gctggtgcac ctgttccccg
2401 agctcttcac gcacgagaac ctgcgcaagc agtacagctg cagcggctcc ctgggcaaga
2461 agcagctgga cccctcccgc atcaagctca tccgccacta cgtgcagctg ctctacccac
2521 gcgccaaaaa cgaccgcgtc tggaccctgg agttcgtggg caaactggat gagcgctgcc
2581 ggcgccggga cacggagcaa aggcgctcct accagcagca gcgcaaggtc cacgtgccgg
2641 gccctgagtg cagagacttg accagctatg caatcaaccc cgagaggttc cgggaggagt
2701 ttgaggggcc cccactgccc cccgagagga gcagcaagga cttttgcaag atccccttgg
2761 acgagctggt ggtcccctcg cctgacttcc cggtgccttc tccctacctg ctgtctgaca
2821 aggaggtgcg tgagatcgtg cagcagagcc tctccgtggg caactttgcc gcccggctcc
2881 tcgtccgcct gtttcccgaa ctcttcaccg ccgagaacct ccggctgcag tacaaccatt
2941 ccggggcttg caacaagaag caactggacc ccacgcggct gcggctcatc cgccactacg
3001 tggaagccgt ctacccggtg gagaagatgg aggaggtgtg gcactacgaa tgtatcccca
3061 gcatcgatga gaggtgccgc cgccccaaca ggaaaaaatg cgacatcctc aagaaagcaa
3121 agaaagtgga gaagtgaagg cccgtgacct gcccagagat tcggggtcac cagaggctga
3181 gcgatgggca cccttgggac tgagcaatac ttgggagcac gcctatggca tccacagaca
3241 tgt
//