LOCUS BC131599 1660 bp mRNA linear HUM 30-JAN-2007 DEFINITION Homo sapiens ras responsive element binding protein 1, mRNA (cDNA clone IMAGE:40114347), complete cds. ACCESSION BC131599 VERSION BC131599.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1660) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1660) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 31 Row: i Column: 8 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1660 /db_xref="H-InvDB:HIT000390561" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40114347" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: TGATCTCT sequenced from the forward primer" gene 1..1660 /gene="RREB1" /gene_synonym="FINB" /gene_synonym="LZ321" /gene_synonym="RREB-1" /gene_synonym="Zep-1" /db_xref="GeneID:6239" /db_xref="HGNC:HGNC:10449" /db_xref="MIM:602209" CDS 148..1584 /gene="RREB1" /gene_synonym="FINB" /gene_synonym="LZ321" /gene_synonym="RREB-1" /gene_synonym="Zep-1" /codon_start=1 /product="RREB1 protein" /protein_id="AAI31600.1" /db_xref="GeneID:6239" /db_xref="HGNC:HGNC:10449" /db_xref="MIM:602209" /translation="MLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCSLRRNG LIPQSKESDVGSHDSTDSQSDAETAAAAGEVLDLTSRDREQPSEGATELRQVAGDAPV EQATAETASPVHREEHGRGESHEPEEEHGTEESTGDADGAEEDASSNQSLDLDFATKL MDFKLAEGDGEAGAGGAASQEQKLACDTCGKSFKFLGTLSRHRKAHGRQEPKDEKGDG ASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAEKPAEETEGPSDGESAAEKRS SEKSDDDKKPKTDSPKSVASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQ TCERTFTLKHSLVRHQRIHQKARHAKHHGKDSDKEERGEEDSENESTHSGNNAVSENE AELAPNASNHMAVTRSRKEGLASATKDCSHREEKVTAGWPSEPGQGDLNPESPAALGQ DLLEPRSKRPAHPILATADGASQLVGME" BASE COUNT 413 a 509 c 540 g 198 t ORIGIN 1 ccccaataag gagggcagct tgataacaca aagaaaacag tgtcaacgag tactaccaag 61 cggaactcgt acaccaactg cctgcagaag atcacctgtc cccactgtcc ccgggttttc 121 ccttgggcca gctccctaca gaggcacatg ctcacacaca ctggtcagaa acccttccct 181 tgtcaaaaat gcgatgcctt cttttctacc aaatctaact gtgaacgcca ccagttgcgc 241 aaacacggag ttaccacctg ttccctgaga agaaacgggc ttatccccca gtcaaaagag 301 agtgatgttg gatcccatga tagcacagac agtcagtcgg atgcggagac tgcagccgcc 361 gcgggcgaag tgctagacct cacctcacgg gacagagagc agccgtcgga gggcgccact 421 gagctccgcc aggtcgcagg ggatgcgcct gtggagcagg ccacggcgga aacggcctcg 481 ccggtgcacc gggaagagca cgggcgtggg gagagccatg agccggagga ggagcatggc 541 actgaggaga gcactgggga cgccgacggc gcggaagagg acgcgtcgag caaccagagc 601 ctggacctgg acttcgccac caagctcatg gacttcaagc tggcggaggg cgacggcgag 661 gcaggcgccg ggggcgcggc ctcgcaggag cagaagctcg cctgcgacac ctgtgggaag 721 agcttcaagt tcctgggcac cctgagccgc caccggaagg cgcacggccg ccaggagccc 781 aaggacgaga agggagatgg cgccagcact gcagaggagg ggccccagcc cgcccctgaa 841 caggaggaga agccccccga gaccccggca gaggtggtgg agtcggcccc gggtgccggg 901 gaggccccgg cggaaaagcc cgcggaggag acggagggcc cctccgacgg ggagagcgcg 961 gccgagaaaa ggtcctcaga gaagagcgac gatgacaaga aaccaaagac agactccccc 1021 aaaagcgtgg ccagcaaggc agacaagagg aagaaggtct gcagcgtgtg caacaagcgg 1081 ttctggtcgc tgcaggacct gacccggcac atgcgctccc acacagggga aaggccatac 1141 aaatgtcaga cctgcgagcg aaccttcacc ttgaagcaca gcctggttcg ccaccagcgg 1201 atccaccaga aagccaggca tgccaaacac cacgggaagg acagcgacaa ggaagagcgg 1261 ggtgaggagg acagcgagaa tgagtccacc cacagcggca acaacgccgt ctcagagaac 1321 gaggctgagc tggctcccaa tgccagcaac cacatggctg tcacccggag ccggaaggag 1381 ggcttggcca gtgccaccaa ggactgcagc cacagggagg agaaggtcac ggcagggtgg 1441 ccgtctgagc ctggccaggg tgaccttaac ccagagagcc cggcggccct ggggcaggac 1501 ctgctggagc cgcgcagcaa gaggcctgcc cacccaatcc tggccacagc tgatggcgcc 1561 tcccagctcg tggggatgga gtgacagcct cagtccccct cagcacagac aaaagccagc 1621 agagcaaagc gtctatactt catggggttt cctcagtgcc //