LOCUS BC131591 2674 bp mRNA linear HUM 28-FEB-2007
DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 2, mRNA
(cDNA clone IMAGE:40113608), partial cds.
ACCESSION BC131591
VERSION BC131591.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2674)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2674)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..2674
/db_xref="H-InvDB:HIT000390554"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40113608"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CAAATAAT sequenced from the reverse primer"
gene <1..2674
/gene="PACS2"
/db_xref="GeneID:23241"
/db_xref="HGNC:HGNC:23794"
/db_xref="MIM:610423"
CDS <1..2674
/gene="PACS2"
/codon_start=2
/product="PACS2 protein"
/protein_id="AAI31592.1"
/db_xref="GeneID:23241"
/db_xref="HGNC:HGNC:23794"
/db_xref="MIM:610423"
/translation="TGTGTTAGTRGLEPRPPHCERAGLPCGAPASEGRPAGAGLRRNP
SGAYRLCSLTLKKLVVFKELEKELISVVIAVKMQGSKRILRSHEIVLPPSGQVETDLA
LTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQ
VLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSE
QEASDDAVQGQDLDEDDFDVGKPKKQRRSIQQNFKQKVVALLRRFKVSDEVLDSEQDP
AEHIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQT
EIGSIHSARSHKEPPSPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSP
EAEASTLDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNE
RANSLDNERCPDARSQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDV
LQRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILR
LFVEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEA
QSAVQDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKV
GIVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQG
VGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAAT
PTMSMTVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDG
VECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF"
BASE COUNT 573 a 877 c 815 g 409 t
ORIGIN
1 gacaggcacc gggaccacgg cggggacgcg aggactggag ccgcgacctc cccactgcga
61 gcgagctggc ctcccttgcg gcgcgccggc gtcggagggg cgacctgcgg gggctgggct
121 tcggcggaac ccgagcgggg cctaccggtt gtgcagcctg actctgaaga agctggtggt
181 cttcaaggag ctggagaagg agctgatctc cgtggtgatc gctgtcaaga tgcagggctc
241 caaacgaatc ctgcggtccc atgagattgt gctgcccccc agtggacaag tggagacaga
301 cctggccctg accttctcct tgcagtatcc tcacttcttg aagagggaag gcaacaagct
361 tcagatcatg ctgcagcgca gaaagcgcta caagaacaga accatcctgg gctacaagac
421 gctggccgcg ggctccatca gcatggctga ggtgatgcaa cacccgtctg aaggtggcca
481 ggtgctgagc ctctgcagca gcatcaagga ggcccccgtc aaggcggccg agatctggat
541 cgcctccctg tccagccagc ccattgacca cgaagacagc accatgcagg ccggccccaa
601 ggccaagtcc acggataact actccgagga ggagtatgag agcttctcct ccgagcagga
661 ggccagtgac gacgccgtgc aggggcagga cttggacgag gacgactttg acgtggggaa
721 gccgaagaag cagcggagat cgattcaaca gaacttcaag cagaaagtgg tagcgctgct
781 gcggaggttc aaagtgtccg acgaggtcct ggactcggag caggaccctg cggagcacat
841 ccccgaggca gaggaggacc tggacctcct gtatgacacc ctggacatgg agcaccccag
901 cgacagcggc cccgacatgg aggatgacga cagcgtcctc agcaccccca agccgaagct
961 gcggccatac tttgaaggcc tgtcgcactc gagctcgcag acggagattg ggagcatcca
1021 cagcgcccgc agccacaagg agcccccaag cccggctgac gtgcccgaga agacgcggtc
1081 cctgggaggc aggcagccga gcgacagtgt ctctgacacg gtggccctcg gtgtgccagg
1141 cccgagggag caccctggac agcctgagga cagccccgag gctgaggcct ccaccctgga
1201 tgtgttcacg gagaggctgc cgcccagcgg gaggatcacc aagacagagt cccttgtcat
1261 cccctccacc aggtccgagg ggaagcaggc tggccgacgg ggccggagca catccttgaa
1321 ggagcggcag gcagcacggc cccagaatga gcgggccaac agcctggaca acgagcgctg
1381 cccggacgcc cggagccagc tacagatccc caggaagact gtgtatgacc agctcaacca
1441 catcctcatc tccgatgacc agcttcccga aaacatcatc cttgtcaaca cctcggactg
1501 gcaggggcag ttcctctccg acgtcctgca gaggcacacg ctccccgtgg tgtgcacgtg
1561 ctctcctgcg gacgtccagg cggccttcag caccatcgtc tcacggatac agagatactg
1621 caactgcaat tcccagcccc cgacccccgt gaagatcgcc gtggcgggag cgcagcatta
1681 cctcagtgcc atcctgcggc tctttgtgga gcagctgtcc cacaagacac ccgactggct
1741 cggctacatg cgcttcctgg tcatcccact gggctcccac cccgtggcca ggtacctagg
1801 ctccgtggac taccgctaca acaacttctt ccaggacctg gcctggagag acctgttcaa
1861 caagctggag gcccagagtg cggtacagga cacgccagac attgtgtcac gcatcacgca
1921 gtacatcgca ggggccaact gtgcccacca gctccccatc gcagaggcca tgctgaccta
1981 caagcagaag agccctgacg aagagtcctc ccaaaagttc attccctttg tcggggttgt
2041 gaaggttgga attgtggagc catcctcggc cacatcaggc gactcggacg acgcggcccc
2101 ctcgggctct ggcacgctct cctccacccc gccgtccgca tctcctgcgg ccaaggaggc
2161 ctcacccacc ccgccctcct ccccgtcggt gagcggaggc ctgtcctccc ccagccaggg
2221 tgtcggcgcc gagctgatgg ggctgcaggt ggactactgg acggcagcac agcctgcgga
2281 caggaagagg gacgccgaga agaaggacct gcctgtcacc aaaaacacgc tcaagtgcac
2341 tttccggtcc ctccaggtca gcaggctgcc cagcagcggc gaggctgcag ccacgcccac
2401 catgtccatg accgtggtca ccaaggagaa gaacaagaag gtgatgtttc tgcccaagaa
2461 agcgaaggac aaggacgtgg agtctaagag ccagtgcatt gagggcatca gccggctcat
2521 ctgcactgcc aggcagcagc agaacatgct gcgggtcctc atcgacggcg tggagtgcag
2581 cgacgtcaag ttcttccagc tggccgcgca gtggtcctcg cacgtgaagc acttccccat
2641 ctgcatcttc ggacactcca aggccacctt ctag
//