LOCUS BC131551 2095 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens selectin E, mRNA (cDNA clone MGC:148047
IMAGE:40085183), complete cds.
ACCESSION BC131551
VERSION BC131551.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2095)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2095)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: e Column: 23.
FEATURES Location/Qualifiers
source 1..2095
/db_xref="H-InvDB:HIT000390514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:148047 IMAGE:40085183"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: ATCCCC sequenced from the reverse primer"
gene 1..2095
/gene="SELE"
/gene_synonym="CD62E"
/gene_synonym="ESEL"
/gene_synonym="LECAM2"
/db_xref="GeneID:6401"
/db_xref="HGNC:HGNC:10718"
/db_xref="MIM:131210"
CDS 117..1949
/gene="SELE"
/gene_synonym="CD62E"
/gene_synonym="ESEL"
/gene_synonym="LECAM2"
/codon_start=1
/product="selectin E"
/protein_id="AAI31552.1"
/db_xref="GeneID:6401"
/db_xref="HGNC:HGNC:10718"
/db_xref="MIM:131210"
/translation="MIASQFLSALTLVLLIKESGAWSYNTSTEAMTYDEASAYCQQRY
THLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNVWVWVGTQKPLTEEAKNWAPGEP
NNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTAACTNTSCSGHGECVETINN
YTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSS
METMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGF
ELMGAQSLQCTSSGNWDNEKPTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFT
CEEGFMLQGPAQVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGS
SCEFSCEQGFVLKGSKRLQCGPTGEWDNEKPTCEAVRCDAVHQPPKGLVRCAHSPIGE
FTYKSSCAFSCEEGFELHGSTQLECTSQGQWTEEVPSCQVVKCSSLAVPGKINMSCSG
EPVFGTVCKFACPEGWTLNGSAARTCGATGHWSGLLPTCEAPTESNIPLVAGLSAAGL
SLLTLAPFLLWLRKCLRKAKKFVPASSCQSLESDGSYQKPSYIL"
BASE COUNT 556 a 510 c 530 g 499 t
ORIGIN
1 cctgagacag aggcagcagt gatacccacc tgagagatcc tgtgtttgaa caactgcttc
61 ccaaaacgga aagtatttca agcctaaacc tttgggtgaa aagaactctt gaagtcatga
121 ttgcttcaca gtttctctca gctctcactt tggtgcttct cattaaagag agtggagcct
181 ggtcttacaa cacctccacg gaagctatga cttatgatga ggccagtgct tattgtcagc
241 aaaggtacac acacctggtt gcaattcaaa acaaagaaga gattgagtac ctaaactcca
301 tattgagcta ttcaccaagt tattactgga ttggaatcag aaaagtcaac aatgtgtggg
361 tctgggtagg aacccagaaa cctctgacag aagaagccaa gaactgggct ccaggtgaac
421 ccaacaatag gcaaaaagat gaggactgcg tggagatcta catcaagaga gaaaaagatg
481 tgggcatgtg gaatgatgag aggtgcagca agaagaagct tgccctatgc tacacagctg
541 cctgtaccaa tacatcctgc agtggccacg gtgaatgtgt agagaccatc aataattaca
601 cttgcaagtg tgaccctggc ttcagtggac tcaagtgtga gcaaattgtg aactgtacag
661 ccctggaatc ccctgagcat ggaagcctgg tttgcagtca cccactggga aacttcagct
721 acaattcttc ctgctctatc agctgtgata ggggttacct gccaagcagc atggagacca
781 tgcagtgtat gtcctctgga gaatggagtg ctcctattcc agcctgcaat gtggttgagt
841 gtgatgctgt gacaaatcca gccaatgggt tcgtggaatg tttccaaaac cctggaagct
901 tcccatggaa cacaacctgt acatttgact gtgaagaagg atttgaacta atgggagccc
961 agagccttca gtgtacctca tctgggaatt gggacaacga gaagccaacg tgtaaagctg
1021 tgacatgcag ggccgtccgc cagcctcaga atggctctgt gaggtgcagc cattcccctg
1081 ctggagagtt caccttcaaa tcatcctgca acttcacctg tgaggaaggc ttcatgttgc
1141 agggaccagc ccaggttgaa tgcaccactc aagggcagtg gacacagcaa atcccagttt
1201 gtgaagcttt ccagtgcaca gccttgtcca accccgagcg aggctacatg aattgtcttc
1261 ctagtgcttc tggcagtttc cgttatgggt ccagctgtga gttctcctgt gagcagggtt
1321 ttgtgttgaa gggatccaaa aggctccaat gtggccccac aggggagtgg gacaacgaga
1381 agcccacatg tgaagctgtg agatgcgatg ctgtccacca gcccccgaag ggtttggtga
1441 ggtgtgctca ttcccctatt ggagaattca cctacaagtc ctcttgtgcc ttcagctgtg
1501 aggagggatt tgaattacat ggatcaactc aacttgagtg cacatctcag ggacaatgga
1561 cagaagaggt tccttcctgc caagtggtaa aatgttcaag cctggcagtt ccgggaaaga
1621 tcaacatgag ctgcagtggg gagcccgtgt ttggcactgt gtgcaagttc gcctgtcctg
1681 aaggatggac gctcaatggc tctgcagctc ggacatgtgg agccacagga cactggtctg
1741 gcctgctacc tacctgtgaa gctcccactg agtccaacat tcccttggta gctggacttt
1801 ctgctgctgg actctccctc ctgacattag caccatttct cctctggctt cggaaatgct
1861 tacggaaagc aaagaaattt gttcctgcca gcagctgcca aagccttgaa tcagatggaa
1921 gctaccaaaa gccttcttac atcctttaag ttcaaaagaa tcagaaacag gtgcatctgg
1981 ggaactagag ggatacactg aagttaacag agacagataa ctctcctcgg gtctctggcc
2041 cttcttgcct actatgccag atgcctttat ggctgaaacc gcaacaccca tcacc
//