LOCUS BC131534 4604 bp mRNA linear HUM 30-JAN-2007
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57, mRNA
(cDNA clone MGC:141843 IMAGE:40082400), complete cds.
ACCESSION BC131534
VERSION BC131534.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4604)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: d Column: 8.
FEATURES Location/Qualifiers
source 1..4604
/db_xref="H-InvDB:HIT000390497"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:141843 IMAGE:40082400"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: NA"
gene 1..4604
/gene="DHX57"
/gene_synonym="DDX57"
/db_xref="GeneID:90957"
/db_xref="HGNC:HGNC:20086"
CDS 72..4232
/gene="DHX57"
/gene_synonym="DDX57"
/codon_start=1
/product="DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
/protein_id="AAI31535.1"
/db_xref="GeneID:90957"
/db_xref="HGNC:HGNC:20086"
/translation="MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGG
GGGGGNRKASSRIWDDGDDFCIFSESRRPSRPSNSNISKGESRPKWKPKAKVPLQTLH
MTSENQEKVKALLRDLQEQDADAGSERGLSGEEEDDEPDCCNDERYWPAGQEPSLVPD
LDPLEYAGLASVEPYVPEFTVSPFAVQKLSRYGFNTERCQAVLRMCDGDVGASLEHLL
TQCFSETFGERMKISEAVNQISLDECMEQRQEEAFALKSICGEKFIERIQNRVWTIGL
ELEYLTSRFRKSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVGRI
ERSVDDSHLNAIEDASFLYELEIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEF
LYDKALTFAETSEPVVYSLITLLEEESEIVKLLTNTHHKYSDPPVNFLPVPSRTRINN
PACHKTVIPNNSFVSNQIPEVEKASESEESDEDDGPAPVIVENESYVNLKKKISKRYD
WQAKSVHAENGKICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVIS
GMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERAERVGLT
VGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLL
VLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTR
YVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQL
DFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPG
LAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTN
IAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGV
CFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHT
DSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIA
ASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYC
RQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEAN
SNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYV
HIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRG
EFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIIST
IVKLVTTQ"
BASE COUNT 1374 a 952 c 1086 g 1192 t
ORIGIN
1 ttggacctct gacccttggg cagcacctcc cgacagccgg ctcgggaccc aactctgcga
61 gccaggtgaa aatgagttct tcagtaagaa gaaaaggcaa gccaggcaaa ggaggtggaa
121 aagggtcttc tagaggagga agaggaggca ggagtcacgc cagtaaatct catgggagtg
181 gtggcggtgg cggtggtggt ggtggtggag gtggcggcaa cagaaaggcc tccagtagaa
241 tatgggatga tggagatgac ttttgtatct tcagtgaatc aaggcgccct tccagaccta
301 gcaacagtaa cataagcaaa ggagagtcac gcccaaaatg gaaacccaaa gccaaagtac
361 cccttcagac tctacatatg acttctgaga atcaagagaa agtgaaagct cttctccgag
421 acctgcaaga acaagatgct gatgctggat ctgaaagagg cctttctggg gaggaggaag
481 atgatgagcc tgattgctgt aacgatgagc ggtactggcc agctggacag gaaccttccc
541 tcgttcccga cttggatcct ttggaatatg ctggcttagc ctcagtggag ccttatgttc
601 cagaatttac agtctcccca tttgcagtgc aaaaactttc caggtatggt ttcaatactg
661 aacgctgtca agcggtcctg aggatgtgtg atggagatgt gggagcatca ctagagcatc
721 tccttaccca gtgtttttca gagacatttg gagagaggat gaagatctct gaggcagtca
781 accagataag cttggatgag tgtatggaac agcgacagga agaggcattt gctctcaagt
841 ccatctgtgg agaaaaattt atagaaagaa ttcagaacag agtctggacc attgggttag
901 aactggagta tctgacaagt agattccgca aatccaagcc aaaagaaagt accaaaaatg
961 tacaagagaa ttcacttgaa atctgtaaat tttacctcaa aggaaattgt aaatttggat
1021 caaaatgcag attcaaacat gaagtgcccc caaatcaaat tgttggaaga atagaaagaa
1081 gtgtagatga ttctcatctt aatgctattg aagatgcatc ttttttatat gaacttgaaa
1141 ttcgattttc taaagaccac aaatatccct accaagctcc gctcgtggca ttttattcca
1201 ccaatgagaa cctacctctg gcttgtcgtt tacatatttc tgagtttctt tatgacaagg
1261 ccttgacatt tgcggaaact tcggaacctg tcgtatattc tttgataacc cttttagagg
1321 aagagtcgga aatagtcaag ttactaacga atacccacca caagtatagt gaccctcctg
1381 tgaactttct gccagtaccc tctaggacca gaataaataa tcctgcctgt cataaaacag
1441 tgattccaaa taattctttt gtttctaatc aaattccaga agttgaaaaa gcatcagaat
1501 ctgaggagtc agatgaggat gacggtcctg cacctgttat agtagagaat gaaagctatg
1561 tgaaccttaa gaaaaagatt tccaaaagat atgactggca ggcaaagtca gtacatgctg
1621 aaaatggtaa aatctgcaag cagttccgaa tgaaacaggc ttccagacag ttccagtcca
1681 ttctgcaaga gaggcaatca ctccctgctt gggaagaaag agaaaccatt cttaacttat
1741 tgcgtaagca ccaggtggtt gtcataagtg gtatgactgg atgtgggaaa accacacaaa
1801 ttccgcagtt tattctggat gattctctga gtggaccacc tgagaaggta gccaacatca
1861 tctgtaccca accccgacga atctctgcaa tctctgttgc tgaacgcgtt gctaaagaaa
1921 gagcagagag ggtgggtctg accgtgggat accagattcg gttagaaagt gtcaagtcct
1981 cagccaccag actgttatac tgcaccacgg gagtgctgct gagaaggcta gaaggagata
2041 cagctctaca aggagtttcc catatcattg ttgatgaagt tcatgagagg acagaagaaa
2101 gtgacttctt gctgctagtt ttgaaggaca ttgtatcgca gaggccaggt cttcaagtta
2161 ttttaatgag tgcaactcta aacgctgagc ttttttcaga ctattttaat tcctgccccg
2221 ttattactat accaggtcgt acatttcctg ttgatcaatt ttttttggaa gatgcaattg
2281 ctgtgacaag gtatgtatta caggatggga gcccatatat gcggtccatg aaacagattt
2341 caaaggaaaa gcttaaagca aggcggaaca gaactgcatt tgaagaagtg gaagaagacc
2401 taaggctctc ccttcacctc caggatcagg attctgtcaa agatgcagtg ccagatcaac
2461 agttagattt taagcagctc ctggcccgct ataaaggggt tagcaagtca gtcatcaaaa
2521 caatgtccat catggatttt gaaaaggtga atcttgaatt aatagaggcc ttattagagt
2581 ggattgtgga tggaaagcac tcctaccctc caggtgctat acttgtattt ttaccaggac
2641 tagcagaaat caaaatgctt tatgaacagc tacagtctaa ttctcttttc aacaacagac
2701 gtagtaatcg atgtgttatt cacccacttc attcatcttt atccagtgaa gagcagcagg
2761 ctgtgtttgt aaaacctcct gcaggagtaa ctaagattat aatttccacc aacattgctg
2821 agacatccat aaccatcgat gatgttgtct atgttatcga ttctgggaaa atgaaagaaa
2881 agagatatga tgccagcaaa gggatggaaa gtctagagga cacctttgta tctcaagcta
2941 atgctctaca aaggaaaggc cgagcaggcc gtgttgcatc tggggtctgc ttccatttat
3001 tcactagcca tcactacaat caccagcttt taaaacaaca gctaccagaa atacaaagag
3061 tgccattgga acagctgtgt ctaagaatta aaattttaga gatgtttagt gctcataatc
3121 tccagtctgt gttctctcgg ctcattgaac ctccacacac cgattctctt cgtgcctcaa
3181 aaatacgatt acgagactta ggagcattaa ctccagatga aagattgacc cctcttgggt
3241 atcatttggc ctctctgccc gtggatgtga gaattggcaa actaatgttg tttgggtcta
3301 tcttccgctg tttggatcct gctctcacca ttgctgccag tttggctttt aagtcgccgt
3361 ttgtatctcc ctgggataaa aaagaagaag ctaaccagaa aaagctggaa tttgcattcg
3421 caaacagtga ttatctggcc cttctacaag cgtataaggg atggcagcta agtacaaaag
3481 aaggcgtgcg tgcaagttat aattactgca gacaaaactt cttgtctgga agagttctgc
3541 aggaaatggc cagcctcaaa cgacaattca cggaactgtt atcggatata gggtttgcaa
3601 gggaagggct cagagcaagg gaaattgaga aaagggccca aggaggagat ggtgtcttag
3661 atgccacagg agaagaggca aactcaaatg ctgagaaccc caagctgata tcagcaatgc
3721 tgtgtgctgc tttgtatcca aatgtagtgc aggtgaaaag cccagaagga aaatttcaga
3781 agaccagtac tggagctgtc agaatgcaac caaaatcagc tgagttgaag tttgtcacca
3841 agaacgatgg atatgtacac attcaccctt catcagtgaa ctatcaggtg agacactttg
3901 acagccccta cctgttgtac cacgagaaga taaaaactag tcgagtattc atccgagact
3961 gcagcatggt gtctgtgtac ccgctggtct tgtttggagg aggccaagtg aatgtgcagc
4021 ttcaaagagg agagttcgtt gtctccctgg atgatggttg gatccgtttt gtagctgctt
4081 cccatcaggt ggctgaactg gtaaaggagc ttcgttgtga acttgatcag cttctccagg
4141 ataaaattaa aaacccaagc attgatctgt gtacgtgtcc tcgaggatcc cggatcatca
4201 gcacaattgt gaaacttgtc accacacaat aaaaagcagt cttagagagt gcttgctact
4261 cacctgcttc tagctcacct gggaaataac agcagaacct ctacctcgaa ctaaagacct
4321 attggggctg gccctggtgg aggagcccag ggcatgaagc ccaaggcagc tgaggcagtg
4381 tatataccct tagggccatt tctaacaaag ccttggccac tcccagcaca atttggagtg
4441 tcaagggtga gagcctaaaa cccagcttgc ctgtctttgt ctctgtgatt gttctggagt
4501 gaattaagtt cacctgataa ctcaaaagtg aatgtataat acaattctgt tttaatctgt
4561 gtattctttt tctcctactt tttactgggg tgagaggggc agat
//