LOCUS BC131510 881 bp mRNA linear HUM 17-JUL-2007 DEFINITION Homo sapiens iroquois homeobox 5, mRNA (cDNA clone IMAGE:40083630), complete cds. ACCESSION BC131510 VERSION BC131510.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 881) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 881) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 31 Row: e Column: 8 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..881 /db_xref="H-InvDB:HIT000390473" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40083630" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: TGTCTCCT sequenced from the reverse primer" gene 1..881 /gene="IRX5" /gene_synonym="IRX-2a" /db_xref="GeneID:10265" /db_xref="HGNC:HGNC:14361" /db_xref="MIM:606195" CDS 1..441 /gene="IRX5" /gene_synonym="IRX-2a" /codon_start=1 /product="IRX5 protein" /protein_id="AAI31511.1" /db_xref="GeneID:10265" /db_xref="HGNC:HGNC:14361" /db_xref="MIM:606195" /translation="MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSA FSPYAGSTAFTAPSPGYNSHLQYGADPAAAAAAAFSSYVLLKKEKKSLDFPCFPPLRP TCVRSPAERGVASVAQASICMEGRAAVARSAHGGSPYAHRVPGP" BASE COUNT 147 a 319 c 240 g 175 t ORIGIN 1 atgtcctatc cgcagggcta cttgtaccag ccgtccgcct cgctggcgct ctactcgtgc 61 ccggcgtaca gcaccagcgt catttcgggg ccccgcacgg atgagctcgg ccgctcttct 121 tcgggctccg cgttctcgcc ctacgctggc tcgactgcct tcacggcgcc ctcgccgggc 181 tacaactcgc acctccagta cggcgccgac cccgcggccg ccgccgccgc cgccttctcc 241 tcgtacgtgc tgttgaaaaa agaaaaaaag agccttgact tcccttgttt tccccccttg 301 cgcccaacgt gcgtccgctc ccccgccgag cgcggagtcg cctcagttgc ccaggcctct 361 atctgcatgg agggccgggc cgccgtggcc agatctgcgc acgggggctc tccctacgcc 421 caccgtgtcc cgggcccata gccgggcaag ccctaggagg cagccgggcg tcgccggccc 481 cggcgccgtc acgctcgccc tcggcgcagt gtccttttcc aggcgggacg gtgctgtccc 541 ggcctctcta ctacaccgcg cccttctatc ccggctacac gaactatggc tccttcggac 601 accttcatgg ccacccgggg cccgggccag gccccacaac cggtccgggg tctcatttca 661 atggattaaa ccagaccgtg ttgaaccgag cggacgcttt ggctaaagac ccgaaaatgt 721 tgcggagcca gtctcagcta gacctgtgca aagactctcc ctatgaattg aagaaaggta 781 tgtccgacat ttaacgcggg ctgcgtcggt cccggacttt tctaatttat taaaaacatg 841 gccttggcag ttatttttcc atcaccgaga gagagagaca g //