LOCUS BC131486 2026 bp mRNA linear HUM 23-NOV-2007
DEFINITION Homo sapiens EFR3 homolog A (S. cerevisiae), mRNA (cDNA clone
IMAGE:40028675), partial cds.
ACCESSION BC131486
VERSION BC131486.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2026)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 31 Row: a Column: 19.
FEATURES Location/Qualifiers
source 1..2026
/db_xref="H-InvDB:HIT000390449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40028675"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: ACTCTG sequenced from
the forward primer"
gene <1..2026
/gene="EFR3A"
/db_xref="GeneID:23167"
/db_xref="HGNC:HGNC:28970"
CDS <1..2026
/gene="EFR3A"
/codon_start=2
/product="EFR3A protein"
/protein_id="AAI31487.1"
/db_xref="GeneID:23167"
/db_xref="HGNC:HGNC:28970"
/translation="WLNPRSCHSDPEIRTEIRIAGIRGIQGVVRKTVNDELRATIWEP
QHMDKIVPSLLFNMQKIEEVDSRIGPPSSPSATDKEENPAVLAENCFRELLGRATFGN
MNNAVRPVFAHLDHHKLWDPNEFAVHCFKIIMYSIQAQYSHHVIQEILGHLDARKKDA
PRVRAGIIQVLLEAVAIAAKGSIGPTVLEVFNTLLKHLRLSVEFEANDLQGGSVGSVN
LNTSSKDNDEKIVQNAIIQTIGFFGSNLPDYQRSEIMMFIMGKVPVFGTSTHTLDISQ
LGDLGTRRIQIMLLRSLLMVTSGYKAKTIVTALPGSFLDPLLSPSLMEDYELRQLVLE
VMHNLMDRHDNRAKLRGIRIIPDVADLKIKREKICRQDTSFMKKNGQQLYRHIYLGCK
EEDNVQKNYELLYTSLALITIELANEEVVIDLIRLAIALQDSAIINEDNLPMFHRCGI
MALVAAYLNFVSQMIAVPAFCQHVSKVIEIRTMEAPYFLPEHIFRDKCMLPKSLEKHE
KDLYFLTNKIAESLGGSGYSVERLSVPYVPQVTDEDRLSRRKSIVDTVSIQVDILSNN
VPSDDVVSNTEEITFEALKKAIDTSGMEEQEKEKRRLVIEKFQKAPFEEIAAQCESKA
NLLHDRLAQILELTIRPPPSPSGTLTITSGHAQYQSVPVYEMKFPDLCVY"
BASE COUNT 625 a 386 c 447 g 568 t
ORIGIN
1 atggctaaat cctcgttcct gtcatagtga tccagaaata cgaacagaga tacgaattgc
61 tggaattaga ggtattcaag gtgtggttcg caaaacagtc aacgatgaac ttcgggccac
121 catttgggaa cctcagcata tggataagat tgttccatcc ctcctgttta acatgcaaaa
181 gatagaagaa gttgacagtc gcataggccc tccttcttct ccttctgcaa ctgacaaaga
241 agagaatcct gctgtgctgg ctgaaaactg tttcagagaa ctgctgggtc gagcaacttt
301 tgggaatatg aataatgctg ttagaccagt ttttgcgcat ttagatcatc acaaactgtg
361 ggatcccaat gaatttgcag ttcactgctt taaaattata atgtattcca ttcaggctca
421 gtattctcac catgtgatcc aggagattct aggacacctt gatgctcgta aaaaagatgc
481 tccccgggtt cgagcaggta ttattcaggt tctgttagag gctgttgcca ttgctgctaa
541 aggttccata ggtccgacag tgctggaagt cttcaatacc cttttgaaac atctgcgtct
601 cagcgttgaa ttcgaagcaa atgatttaca ggggggatct gtaggcagtg tcaacttaaa
661 tacaagttcc aaagacaatg atgagaagat tgtgcagaat gctatcatcc aaacaatagg
721 attttttgga agtaacctac cagattatca gaggtcagaa atcatgatgt tcattatggg
781 gaaagtacct gtctttggaa catctaccca tactttggat atcagtcaac taggggattt
841 gggaaccagg agaattcaga taatgttgct gagatctttg cttatggtga cctctggata
901 taaagcgaag acgattgtta ctgcactgcc agggtctttc ctggatcctt tgttatcacc
961 atctctcatg gaggactacg aactgagaca gttggtcttg gaagtaatgc ataatctcat
1021 ggatcgtcat gacaataggg caaagcttcg agggatcaga ataataccgg atgtagctga
1081 cctaaagata aaaagagaaa aaatttgcag acaagacaca agtttcatga aaaagaatgg
1141 gcaacagctg tatcggcaca tatatttggg ttgtaaagag gaagacaacg ttcagaaaaa
1201 ctatgaacta ctttatactt ctcttgctct tataactatt gaactggcta atgaagaagt
1261 agttattgat ctcattcgac tggccattgc tttacaggac agtgcaatta tcaatgagga
1321 taatttgcca atgttccatc gttgtggaat catggcactg gttgcagcat acctcaactt
1381 tgtaagtcag atgatagctg tccctgcatt ttgccagcat gttagcaagg ttattgaaat
1441 tcgaactatg gaagcccctt attttctacc agagcatatc ttcagagata agtgcatgct
1501 tccaaaatct ttagagaagc atgaaaaaga tttgtacttt ctgaccaaca agattgcaga
1561 gtcgctaggt ggaagtggat atagtgttga gagattgtca gttccgtatg taccacaagt
1621 aacagatgaa gatcgacttt ctagaagaaa aagcattgtg gacaccgtat ccattcaggt
1681 ggatatttta tccaacaatg ttccttctga tgatgtggtt agtaacactg aagaaatcac
1741 ttttgaagca ttgaagaaag caattgatac cagtggaatg gaagaacagg aaaaggaaaa
1801 gaggcgtctt gtgatagaga aatttcagaa agcacctttt gaagaaatag cagcacagtg
1861 tgaatccaaa gcaaatttgc ttcatgatag acttgcccaa atattggaac tcaccatacg
1921 tcctcctccc agtccatcag gaacactgac cattacttct gggcatgccc aataccaatc
1981 tgtcccagtc tatgagatga agtttccaga tctgtgtgtg tactga
//