LOCUS BC130611 2941 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens inturned planar cell polarity effector homolog
(Drosophila), mRNA (cDNA clone MGC:163483 IMAGE:40146642), complete
cds.
ACCESSION BC130611
VERSION BC130611.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: O Column: 2.
FEATURES Location/Qualifiers
source 1..2941
/db_xref="H-InvDB:HIT000390401"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163483 IMAGE:40146642"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTCCCTCG"
gene 1..2941
/gene="INTU"
/gene_synonym="INT"
/db_xref="GeneID:27152"
/db_xref="HGNC:HGNC:29239"
/db_xref="MIM:610621"
CDS 70..2898
/gene="INTU"
/gene_synonym="INT"
/codon_start=1
/product="inturned planar cell polarity effector homolog
(Drosophila)"
/protein_id="AAI30612.1"
/db_xref="GeneID:27152"
/db_xref="HGNC:HGNC:29239"
/db_xref="MIM:610621"
/translation="MASVASCDSRPSSDELPGDPSSQEEDEDYDFEDRVSDSGSYSSA
SSDYDDLEPEWLDSVQKNGELFYLELSEDEEESLLPETPTVNHVRFSENEIIIEDDYK
ERKKYEPKLKQFTKILRRKRLLPKRCNKKNSNDNGPVSILKHQSNQKTGVIVQQRYKD
VNVYVNPKKLTVIKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGDGERLVVHGLLPGGS
AMKSGQVLIGDVLVAVNDVDVTTENIERVLSCIPGPMQVKLTFENAYDVKRETSHPRQ
KKTQSNTSDLVKLLWGEEVEGIQQSGLNTPHIIMYLTLQLDSETSKEEQEILYHYPMS
EASQKLKSVRGIFLTLCDMLENVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPA
EEVPLPRLRNMIENVIQTLKFMYGSLDSAFCQIENVPRLDHFFNLFFQRALQPAKLHS
SASPSAQQYDASSAVLLDNLPGVRWLTLPLEIKMELDMALSDLEAADFAELSEDYYDM
RRLYTILGSSLFYKGYLICSHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLIIWREVF
PQHHLRPLADSSTEVFPEPEGRYFLLVVGLKHYMLCVLLEAGGCASKAIGSPGPDCVY
VDQVKTTLHQLDGVDSRIDERLASSPVPCLSCADWFLTGSREKTDSLTTSPILSRLQG
TSKVATSPTCRRTLFGDYSLKTRKPSPSCSSGGSDNGCEGGEDDGFSPHTTPDAVRKQ
RESQGSDGLEESGTLLKVTKKKSTLPNPFHLGNLKKDLPEKELEIYNTVKLTSGPENT
LFHYVALETVQGIFITPTLEEVAQLSGSIHPQLIKNFHQCCLSIRAVFQQTLVEEKKK
GLNSGDHSDSAKSVSSLNPVKEHGVLFECSPGNWTDQKKAPPVMAYWVVGRLFLHPKP
QELYVCFHDSVTEIAIEIAFKLFFGLTL"
BASE COUNT 871 a 598 c 665 g 807 t
ORIGIN
1 atggcggcct tagcaagcta tagctgcgag atttgaatta ctccactcgt agctattgca
61 ttcctgacga tggcctctgt ggcttcgtgc gattcgcgtc cgagctcaga cgagctccct
121 ggagacccct cttcacaaga agaagatgag gactatgatt ttgaagatcg ggtcagcgac
181 tcgggttcat attcctcagc gagtagcgat tatgatgatc ttgagcctga atggctggac
241 agtgtgcaga aaaatggaga gctgttttat ttggaattga gtgaggatga agaagaaagc
301 ctccttcctg agacaccaac tgtgaaccat gtcaggttca gtgaaaatga gattatcatt
361 gaagatgact acaaagaaag aaaaaagtat gaacccaaac tcaagcagtt taccaaaatt
421 ttaagaagga aaagactttt acccaagcgc tgcaataaaa aaaatagcaa tgacaatgga
481 ccagtatcca ttctaaagca tcagtccaat cagaagacag gagtcattgt ccaacagcga
541 tacaaagatg tgaatgttta tgtaaacccc aaaaagctaa ctgttatcaa agccaaagag
601 cagctcaagc ttctggaagt gctggttgga attattcatc agaccaagtg gagctggaga
661 agaaccggaa agcagggtga tggagagagg cttgtggttc atggcctgct gccaggggga
721 tctgctatga agagcggtca ggtactcatt ggtgatgtcc ttgttgctgt gaatgatgtc
781 gatgttacta ctgaaaacat cgagagagtt ctgtcttgca ttcctggacc tatgcaggtg
841 aaactgacat ttgaaaatgc atatgatgtg aaaagggaga cgtcccatcc aagacagaaa
901 aagacacagt ccaacacaag tgatttagtc aagcttctct ggggagaaga ggttgaaggt
961 atccagcaga gtggcctaaa cactcctcat atcattatgt atctcacact acagctcgac
1021 tcagaaacct caaaggaaga gcaggaaatt ctttatcatt atccaatgtc tgaagcatct
1081 cagaaactta aaagtgtgag agggattttt ctcacactct gtgacatgct ggaaaacgta
1141 actgggacac aagttactag ttcatccctc cttttaaatg gaaaacaaat tcatgtggct
1201 tattggaaag aatctgacaa gttgttgcta attggcctgc ctgctgaaga agttcctctt
1261 cctcgtctaa ggaacatgat agaaaatgtc atccaaacct taaaatttat gtatggttct
1321 ttagatagtg ccttttgcca gattgagaat gttcctcgtt tggatcattt ttttaacttg
1381 ttctttcaaa gagcacttca gcctgcgaaa ctgcattcca gcgccagtcc cagtgctcag
1441 cagtacgatg cttccagtgc agtactttta gacaacctcc ctggagtccg gtggctcaca
1501 cttccactgg aaatcaagat ggaattagac atggcattaa gtgacttgga ggctgcagat
1561 tttgcagaac tgtccgagga ttactatgac atgaggcggc tgtatacaat tttggggtct
1621 tctctatttt acaagggtta tttgatatgc agtcatttgc ccaaggatga tcttattgat
1681 attgccgtat actgtcgcca ctattgcctg ctgcctttag cagcaaaaca aagaattggt
1741 cagttgatca tatggagaga agtgtttcct cagcatcacc tccgaccttt ggcagactca
1801 agcactgaag tctttccgga acctgaagga agatattttt tgctagttgt tggcttgaaa
1861 cattatatgc tatgtgtact attagaagct ggaggttgcg catccaaagc tattgggagt
1921 cctggaccag actgtgtata tgtggatcaa gtcaaaacaa ctcttcacca gctggatgga
1981 gtagattctc gcatagatga acggctagca tcttctccag tcccctgttt gtcttgtgct
2041 gactggttcc ttactggatc acgtgaaaaa acagatagct tgaccacttc gcctattctc
2101 agtaggctac aaggtacttc caaagtagca acttctccaa catgcagaag aacgcttttt
2161 ggtgactatt ccttaaagac acgcaagcct agtccttcct gtagtagtgg aggatctgac
2221 aatggttgtg aaggtggaga agatgatggc tttagccccc atactacacc ggatgcagta
2281 cggaagcaaa gagaatctca gggctctgat ggtttagaag aaagtgggac cttgcttaag
2341 gtcactaaaa agaagtctac tcttccaaat ccatttcatt tgggaaactt gaaaaaggac
2401 cttccagaaa aagaattaga aatatataac acagtgaaac tgacatctgg tcctgagaac
2461 acacttttcc actacgttgc cttagaaaca gtgcaaggaa tctttattac tcctaccctt
2521 gaagaggtgg cacagctaag tggctctatc caccctcagc taataaagaa tttccatcag
2581 tgttgtcttt ccattcgtgc agttttccaa cagacattgg tggaagagaa aaagaaagga
2641 ctaaatagtg gagaccattc agattctgca aagtcagtgt cttctcttaa ccctgttaaa
2701 gaacatggtg tgttgtttga atgttcacct ggaaactgga ctgatcagaa aaaagcacca
2761 ccagttatgg cttactgggt agtagggaga ctttttcttc atccaaaacc tcaagaactt
2821 tatgtctgtt ttcatgactc agtcacagaa attgccattg aaatagcttt taaattgttc
2881 tttgggttaa ccttgtagct gtgctttctt gatgcgtaga aacacgtgca tggaggatca
2941 a
//