LOCUS BC130585 1794 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens keratin 6C, mRNA (cDNA clone MGC:163457
IMAGE:40146616), complete cds.
ACCESSION BC130585
VERSION BC130585.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1794)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1794)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: M Column: 24.
FEATURES Location/Qualifiers
source 1..1794
/db_xref="H-InvDB:HIT000390375"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163457 IMAGE:40146616"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCTGGTTC"
gene 1..1794
/gene="KRT6E"
/db_xref="GeneID:286887"
/db_xref="HGNC:HGNC:20406"
CDS 28..1722
/gene="KRT6E"
/codon_start=1
/product="keratin 6C"
/protein_id="AAI30586.1"
/db_xref="GeneID:286887"
/db_xref="HGNC:HGNC:20406"
/translation="MASTSTTIRSHSSSRRGFSANSARLPGVSRSGFSSISVSRSRGS
GGLGGACGGAGFGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGF
GGGAGIGFGLGGGAGLAGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPAIQRVR
AEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPLFEQYI
NNLRRQLDSIVGERGRLDSELRNMQDLVEDLKNKYEDEINKRTAAENEFVTLKKDVDA
AYMNKVELQAKADTLTDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSII
AEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR
SEIDHVKKQCASLQAAIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQE
LMNVKLALDVEIATYRKLLEGEECRLNGEGVGQVNVSVVQSTISSGYGGASGVGSGLG
LGGGSSYSYGSGLGIGGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTSSSSRKSYKH"
BASE COUNT 404 a 491 c 570 g 329 t
ORIGIN
1 gccacagccc tctcatctcc tggaaccatg gccagcacat ccaccaccat caggagccac
61 agcagcagcc gccggggttt cagtgccaac tcagccaggc tccctggggt cagccgctct
121 ggcttcagca gcatctccgt gtcccgctcc aggggcagtg gtggcctggg tggcgcatgt
181 ggaggagctg gctttggcag ccgcagtctg tatggcctgg ggggctccaa gaggatctcc
241 attggagggg gcagctgtgc catcagtggc ggctatggca gcagagccgg aggcagctat
301 ggctttggtg gcgccgggag tggatttggt ttcggtggtg gagccggcat tggctttggt
361 ctgggtggtg gagccggcct tgctggtggc tttgggggcc ctggcttccc tgtgtgcccc
421 cctggaggca tccaagaggt cactgtcaac cagagtctcc tgactcccct caacctgcaa
481 attgaccccg ccatccagcg ggtgcgggcc gaggagcgtg agcagatcaa gaccctcaac
541 aacaagtttg cctccttcat cgacaaggtg cggttcctag agcagcagaa caaggttctg
601 gacaccaagt ggaccctgct gcaggagcag ggcaccaaga ctgtgaggca gaacctggag
661 ccgttgttcg agcagtacat caacaacctc aggaggcagc tggacagcat cgtcggggaa
721 cggggccgcc tagactcgga gctgagaaac atgcaggacc tggtggagga cctcaagaac
781 aaatatgagg atgaaatcaa caagcgcaca gcagcagaga atgaatttgt gactctgaag
841 aaggatgtgg atgctgccta catgaacaag gttgaactgc aagccaaggc agacactctc
901 acagatgaga tcaacttcct gagagccttg tatgatgcag agctgtccca gatgcagacc
961 cacatctcag acacatccgt ggtgctatcc atggacaaca accgcaacct ggacctggac
1021 agcatcatcg ctgaggtcaa ggcccaatac gaggagattg ctcagaggag ccgggctgag
1081 gctgagtcct ggtaccagac caagtacgag gagctgcagg tcacagcagg cagacatggg
1141 gacgacctgc gcaacaccaa gcaggagatt gctgagatca accgcatgat ccagaggctg
1201 agatctgaga tcgaccatgt caagaagcag tgtgccagcc tgcaggctgc cattgctgat
1261 gctgagcagc gtggggagat ggccctcaag gatgctaaga acaagctgga agggctggag
1321 gatgccctgc agaaggccaa acaggacctg gcccggctgc tgaaggagta ccaggagctg
1381 atgaatgtca agctggccct ggatgtggag atcgccacct accgcaagct gctggagggc
1441 gaggagtgca ggctgaatgg cgaaggcgtt ggacaagtca acgtctctgt agtacagtcc
1501 accatctcca gtggctatgg cggtgccagc ggtgtcggca gtggcttagg cctgggtgga
1561 ggaagcagct actcctatgg cagtggtctt ggcattggag gtggcttcag ttccagcagt
1621 ggcagagcca ttgggggtgg cctcagctct gttggaggcg gcagttccac catcaagtac
1681 accaccacct cctcctccag caggaagagc tacaagcact aaagtgctgc ctccagctct
1741 cggtcccaca gtcctcaggc ccttctctgg ctgcagagcc gtcttctcag gttg
//