LOCUS BC130574 2148 bp mRNA linear HUM 18-JAN-2007 DEFINITION Homo sapiens peptidyl arginine deiminase, type I, mRNA (cDNA clone MGC:163446 IMAGE:40146605), complete cds. ACCESSION BC130574 VERSION BC130574.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2148) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2148) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 8 Row: M Column: 13. FEATURES Location/Qualifiers source 1..2148 /db_xref="H-InvDB:HIT000390364" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:163446 IMAGE:40146605" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_362" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: GTGCAAAC" gene 1..2148 /gene="PADI1" /gene_synonym="HPAD10" /gene_synonym="PAD1" /gene_synonym="PDI" /gene_synonym="PDI1" /db_xref="GeneID:29943" /db_xref="HGNC:HGNC:18367" /db_xref="MIM:607934" CDS 72..2063 /gene="PADI1" /gene_synonym="HPAD10" /gene_synonym="PAD1" /gene_synonym="PDI" /gene_synonym="PDI1" /codon_start=1 /product="peptidyl arginine deiminase, type I" /protein_id="AAI30575.1" /db_xref="GeneID:29943" /db_xref="HGNC:HGNC:18367" /db_xref="MIM:607934" /translation="MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSG SSGVEVFMVYNRTRVKEPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQED QALGRSVLYLTGVDISLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHR SAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARG GNSLSDYKQVLGPQCLSYEVERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGT LPEVTLFTDTVGFRMAPWIMTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANC KLTICPQVENRNDRWIQDEMEFGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFG YVTREIPLPGPSSLDSFGNLDVSPPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRN FLKAQQVQAPVELYSDWLSVGHVDEFLTFVPTSDQKGFRLLLASPSACLKLFQEKKEE GYGEAAQFDGLKHQAKRSINEMLADRHLQRDNLHAQKCIDWNRNVLKRELGLAESDIV DIPQLFFLKNFYAEAFFPDMVNMVVLGKYLGIPKPYGPIINGRCCLEEKVQSLLEPLG LHCIFIDDYLSYHELQGEIHCGTNVRRKPFPFKWWNMVP" BASE COUNT 470 a 606 c 633 g 439 t ORIGIN 1 ggcaaagaag tgcccaggac gggagctggg gagccagggc tgatctagga ggctgggagc 61 caggtgacag gatggcccca aagagagttg tgcagctgtc cctgaagatg cctacccatg 121 ccgtgtgtgt ggtgggagtc gaggcacatg tggacattca cagtgatgtg cccaagggtg 181 ccaacagctt cagggtctct ggaagctccg gggtggaggt cttcatggtc tacaaccgca 241 cacgtgtgaa agagcccata ggcaaggccc gttggccgct agacactgat gcagacatgg 301 tcgtatctgt gggcacagcc agtaaggaat taaaggactt caaggtgagg gtctcctact 361 ttggggagca ggaagaccaa gctctgggcc gcagcgtgct ttacctcact ggcgtcgata 421 tttcccttga ggttgacaca ggccgcacag gcaaggtgaa gaggagccaa ggggacaaga 481 aaacctggcg ctggggccct gagggctatg gggctatctt gctggtgaac tgtgaccggg 541 acaatcacag gtccgcagag cctgacctca cccacagctg gctgatgtcg ctggctgacc 601 tgcaggacat gtccccaatg ctgctgagct gcaatggccc cgacaagctc ttcgacagcc 661 acaagcttgt cttgaacgtg cccttttctg attccaaaag agtgagggtc ttctgtgcca 721 ggggtgggaa ttctctctcg gactacaaac aggtgctggg gccccagtgt ctgtcctatg 781 aagttgagcg acagccaggg gagcaggaga tcaagttcta tgtggagggg ctgaccttcc 841 ccgatgccga tttcctaggg ctggtttccc tcagtgtcag cctggtggac ccggggaccc 901 tgcccgaggt gaccctcttc acagacactg tgggcttccg catggccccc tggatcatga 961 cgcccaacac tcagcctcct gaggagctgt atgtgtgcag agtgatggac actcatggct 1021 ccaatgagaa attcctggag gacatgtctt atctgacatt gaaagccaac tgcaagctga 1081 ccatctgccc tcaagttgaa aatcgaaatg accgctggat ccaggacgag atggagtttg 1141 gctacatcga ggcccctcac aaatccttcc ccgtggtctt tgactccccc cggaacaggg 1201 gcctgaaaga tttcccctat aagaggatcc tgggtcctga ctttggatat gttacccggg 1261 agatcccgct ccctggtccc tccagccttg actccttcgg caacctggac gtcagcccgc 1321 ccgtcacggt gggcggcacg gaataccccc tgggccggat cctcatcggg agcagcttcc 1381 ccaagtccgg tgggcggcag atggccaggg cagtgcggaa cttcctgaag gcacagcagg 1441 tgcaggcacc cgtggagctc tactcggact ggctctctgt gggccatgtg gacgagtttc 1501 tgacctttgt gcctacctct gaccaaaagg gcttccggct gctcctggct agccccagcg 1561 cttgcctcaa actcttccaa gagaagaaag aagagggtta tggggaggca gcccagtttg 1621 atgggttaaa acaccaggca aaaagaagca ttaatgagat gctggcagac agacacctcc 1681 agagagacaa tcttcatgca cagaaatgca ttgactggaa ccgtaatgtg ctgaagcggg 1741 agctgggcct ggcagagagt gacatcgtgg acattcccca gctcttcttc ctgaaaaact 1801 tctacgcgga agccttcttc ccagacatgg ttaacatggt ggtcttaggc aagtacctgg 1861 gcatccccaa gccctacggg cccatcatca atggccgctg ctgcctggag gagaaggtgc 1921 agtccctgct ggagcctctg ggcctgcact gcatcttcat tgatgactac ttgtcctacc 1981 acgagctgca gggggagatc cactgtggca ccaacgtgcg caggaagccc tttcccttca 2041 aatggtggaa catggtgccc tgagcctgcc cccacccgcc atcctctctg ccctcttgct 2101 agggaaccct gccagggtga aggcaaggaa caaccacctg gcctccat //