LOCUS BC130534 1648 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens tyrosine aminotransferase, mRNA (cDNA clone MGC:163406
IMAGE:40146565), complete cds.
ACCESSION BC130534
VERSION BC130534.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: K Column: 21.
FEATURES Location/Qualifiers
source 1..1648
/db_xref="H-InvDB:HIT000390324"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163406 IMAGE:40146565"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AGGTGTGG"
gene 1..1648
/gene="TAT"
/db_xref="GeneID:6898"
/db_xref="HGNC:HGNC:11573"
/db_xref="MIM:276600"
CDS 71..1435
/gene="TAT"
/codon_start=1
/product="tyrosine aminotransferase"
/protein_id="AAI30535.1"
/db_xref="GeneID:6898"
/db_xref="HGNC:HGNC:11573"
/db_xref="MIM:276600"
/translation="MDPYMIQMSSKGNLSSILDVHVNVGGRSSVPGKMKGRKARWSVR
PSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALD
SGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQ
NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPS
NPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCG
GLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRT
PGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEF
TERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHYHCAEGSQE
ECDK"
BASE COUNT 388 a 423 c 428 g 409 t
ORIGIN
1 agctaaggga gctttcgggg ttggcttctt ggaggctgct ttctccttta cttggaaggc
61 ttcgctagtg atggacccat acatgattca gatgagcagc aaaggcaacc tctcctcaat
121 tctggacgtg catgtcaacg ttggtgggag aagctctgtg ccgggaaaaa tgaaaggcag
181 aaaggccagg tggtctgtga ggccctcaga catggccaag aaaactttca accccatccg
241 agccattgtg gacaacatga aggtgaaacc aaatccaaac aaaaccatga tttccctgtc
301 cattggggac cctactgtgt ttggaaacct gcctacagac cctgaagtta cccaggcaat
361 gaaagatgcc ctggactcgg gcaaatataa tggctatgcc ccatccatcg gcttcctatc
421 cagtcgggag gagattgctt cttattacca ctgtcctgag gcacccctag aagctaagga
481 cgtcattctg acaagtggct gcagccaagc tattgacctt tgtttagctg tgttggccaa
541 cccagggcaa aacatcctgg ttccaagacc tggtttctct ctctacaaga ctctggctga
601 gtctatggga attgaggtca aactctacaa tttgttgcca gagaaatctt gggaaattga
661 cctgaaacaa ctggaatatc taattgatga aaagacagct tgtctcattg tcaataatcc
721 atcaaacccc tgtgggtcag tgttcagcaa acgtcatctt cagaagattc tggcagtggc
781 tgcacggcag tgtgtcccca tcttagctga tgagatctat ggagacatgg tgttttcgga
841 ttgcaaatat gaaccactgg ccaccctcag caccgatgtc cccatcctgt cctgtggagg
901 gctggccaag cgctggctgg ttcctggctg gaggttgggc tggatcctca ttcatgaccg
961 aagagacatt tttggcaatg agatccgaga tgggctggtg aagctgagtc agcgcatttt
1021 gggaccctgt accattgtcc agggagctct gaaaagcatc ctatgtcgca ccccgggaga
1081 gttttaccac aacactctga gcttcctcaa gtccaatgct gatctctgtt atggggcgtt
1141 ggctgccatc cctggactcc ggccagtccg cccttctggg gctatgtacc tcatggttgg
1201 aattgagatg gaacatttcc cagaatttga gaacgatgtg gagttcacgg agcggttagt
1261 tgctgagcag tctgtccact gcctcccagc aacgtgcttt gagtacccga atttcatccg
1321 agtggtcatc acagtccccg aggtgatgat gctggaggcg tgcagccgga tccaggagtt
1381 ctgtgagcag cactaccatt gtgctgaagg cagccaggag gagtgtgata aataggcctg
1441 catccattct cctgaggatg tgtcccatct agggaaggct ggactaggcc ttgcggctcc
1501 tcagggactc aggtggccct actgggagag gggcctcaaa tgcaccatgt caagggttca
1561 agattgttcc tgcttttccc caagtacaac cacacccaca ctcagatcct cctcattcac
1621 atcgcagatt ctcccttgct ctgcgctg
//