LOCUS BC130524 3445 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens glucosaminyl (N-acetyl) transferase 2, I-branching
enzyme (I blood group), mRNA (cDNA clone MGC:163396
IMAGE:40146555), complete cds.
ACCESSION BC130524
VERSION BC130524.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: K Column: 11.
FEATURES Location/Qualifiers
source 1..3445
/db_xref="H-InvDB:HIT000390314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163396 IMAGE:40146555"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GACACCCC"
gene 1..3445
/gene="GCNT2"
/gene_synonym="bA360O19.2"
/gene_synonym="bA421M1.1"
/gene_synonym="GCNT2C"
/gene_synonym="IGNT"
/gene_synonym="NAGCT1"
/gene_synonym="ULG3"
/db_xref="GeneID:2651"
/db_xref="HGNC:HGNC:4204"
/db_xref="MIM:600429"
CDS 173..1381
/gene="GCNT2"
/gene_synonym="bA360O19.2"
/gene_synonym="bA421M1.1"
/gene_synonym="GCNT2C"
/gene_synonym="IGNT"
/gene_synonym="NAGCT1"
/gene_synonym="ULG3"
/codon_start=1
/product="glucosaminyl (N-acetyl) transferase 2,
I-branching enzyme (I blood group)"
/protein_id="AAI30525.1"
/db_xref="GeneID:2651"
/db_xref="HGNC:HGNC:4204"
/db_xref="MIM:600429"
/translation="MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYF
RKTACNHALEKMPVFLWENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMV
IHKDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVV
YAGISRLQADLNCLKDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPG
VLPPDHAIKRTKYVHQEHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTREFVDF
VLRDQRAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDR
HGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQS
ETAIQPSWYF"
BASE COUNT 1036 a 689 c 728 g 992 t
ORIGIN
1 cgagacaccg aagcagagga tacaggagga ttaaaggatt caggaaagca agcagccctc
61 cggagaagct gtcgaaattc aagactggca agagaagcaa attcaacctc tcacaccgat
121 catttctcat tccctgaaaa gaagagattg tttccccagg gaagtgaaaa taatgaactt
181 ttggaggtac tgcttttttg ctttcactct gctcagcgtg gtcatttttg tgagatttta
241 cagtagccaa ttgagcccgc caaaaagtta tgagaagctg aacagttcca gtgaaaggta
301 ttttaggaaa actgcctgta atcacgcctt agagaaaatg ccagtctttt tgtgggaaaa
361 tatattacca tcacctttgc gaagtgtccc ttgcaaggat tacctgaccc agaatcacta
421 catcacaagt cccctgtcgg aagaagaggc tgcattccct ttggcctatg tcatggtcat
481 ccataaggac tttgacacct ttgaaaggct ctttagggct atctatatgc cccaaaatgt
541 ctactgtgtt cacgtggatg agaaagcccc agctgagtat aaggaatctg tgaggcagtt
601 actgagttgc ttccaaaatg ctttcattgc ttcaaagaca gagtctgtgg tttatgcagg
661 catttccaga ctccaggctg acctgaactg tctgaaagac cttgtcgcct ctgaggttcc
721 ctggaagtac gtcatcaaca cctgtggaca agacttcccc ctgaaaacca accgggagat
781 agttcagcat ctgaaaggat ttaaagggaa aaatatcacc ccaggggtgc tgcctcctga
841 ccatgcaatt aagcgaacta aatatgtcca ccaagagcat acagataaag gtggcttttt
901 tgtgaaaaat actaatattt tgaaaacttc acctccacat cagctgacca tctactttgg
961 cactgcctat gtggcgctta ccagagagtt tgtcgacttt gttctgcgtg accaaagggc
1021 cattgatcta ctacaatggt caaaagatac ctatagtcct gatgagcatt tctgggtgac
1081 acttaatagg gtttcaggtg ttcctggctc tatgccaaat gcatcctgga ctggaaacct
1141 cagagctata aagtggagtg acatggaaga cagacacgga ggctgccacg gccactatgt
1201 acatggtatt tgtatctatg gaaacggaga cttaaagtgg ctggttaatt caccaagcct
1261 gtttgctaac aagtttgagc ttaataccta cccccttact gtggaatgcc tagaactgag
1321 gcatcgcgaa agaaccctca atcagagtga aactgcgata caacccagct ggtatttttg
1381 agctattcat gagctactca tgactgaagg gaaactgcag ctgggaagag gagcctgttt
1441 ttgtgagaga cttttgcctt cgtaatgtta accgtttcag gaccacgttt atagcttcag
1501 gacctggcta cgtaattata cttaaaatat ccactggaca ctgtgaaata cactaacagg
1561 atggctgggt agagcaatct gggcactttg gccaatttta gtcttgctgt ttcttgatgc
1621 tcacctctat attagtttat tgttaggatc aatgataaat ttaaatgacc tcagatcttt
1681 gcaccagata ctcatcatat acaaatgttt tagtaaaaaa gagaattgta gataatactg
1741 tctaggaaaa taagaattag gtttctttga agaaggaatc ttttataaca ccttaacagt
1801 caccactgtg ctcaaccaga cagatagtga aacagctttc tgggtaattc accaatttcc
1861 tttaaaacat aagctacctg aatggagaat acatcttgtt tctgagtttc aacactagca
1921 tttttggctt actcatggac aaagttctgt atatagtata aagtcattaa caagaaacag
1981 gatatgcttt aagacagaat tcactgtctg ttgcttcagt aaaaggacct cggggaataa
2041 aacatttctc tcttatatgc cagaatgtag gctggtccct atgtcatgtc ttccattaag
2101 aacactaaaa agtccttgca agaatggaga tatgcattca agagaggtgc tatcacatag
2161 atctagtctg aagtctggaa cactttcctc ttctatgacc cctctctccc cagtattatc
2221 ttacttgcaa aatggagacc aaattctatc ctgtgaggct tttaattgca ccatagtatg
2281 ctctgagtag ctttacactg cctggtactg atagtagtgg ctcgattttt aagagccttc
2341 aattgtagat gaacatctct gttatttatc cctcattcat ccatccgttc attcattcag
2401 ccttcaatca acatctcttg agtgtctatt atgtacagga catgtactga gacaaaaagg
2461 aaacataaga gctttttcac tctaaaaatc ttggcaataa tgtcaacacc agaaagcctc
2521 ctctggagaa tcttacagag tgattgtagt ttaatacagg aacacacagg gctgtgtagc
2581 atgataccag gcccaggaga tcagtaatta caaattaagg gttaaatcag agattattca
2641 acagagaggg agaaaggagg agacagaggg aggacctgtt gtgttccagc cattctggta
2701 ttcctttatg tatctaattt cattcaaacc tcacaacagt cttgtgaggc ccttatataa
2761 ttactcccat tttgcagatg aagtaactga ggcttagaaa ggttaatagc accggggaac
2821 aatttctctg ggtgagaatt gggactctgt tgctggtctt ctcagttcat ttcctgaggt
2881 ggatttactg agagaaggtg aaataaagcc atatttagta taccagagaa ggtagatttt
2941 aagaatggtc tcagtgttaa tactgagaaa aagtcctgtc agttcagaaa aaatgtgaag
3001 tctactttag tattcctgta atactaaacc gttgagtttc taaatattta tttattctaa
3061 caaaaagcaa ttactacaaa tggatgacac atttaatgaa cacaatttta ttttttttct
3121 gtaactgtgc ttgttgaatg tcaatcatat ttaaagggaa tgactttgaa gtaaaacctt
3181 ttttcttgct actgaaaaaa atggagttgt tttgggtggt aaagtgttaa ggaataggga
3241 cagctggtca cacaaggaac tcttgaaggc cacatgtgaa aacctgtcac ttgcacagag
3301 gccagtccca ctaaggtgac cagagtgggc tccaagcaca aactgccatt ggctatagat
3361 gggactgtgt ccccccaaaa ttcatgtgtt ggagccttaa ccctcaatgt gatggtattt
3421 gagatggggc ctttggtaag ggaag
//