LOCUS BC130479 1735 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens early B-cell factor 3, mRNA (cDNA clone MGC:163351
IMAGE:40146510), complete cds.
ACCESSION BC130479
VERSION BC130479.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: I Column: 14.
FEATURES Location/Qualifiers
source 1..1735
/db_xref="H-InvDB:HIT000390269"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163351 IMAGE:40146510"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GGCTACAT"
gene 1..1735
/gene="EBF3"
/gene_synonym="COE3"
/gene_synonym="O/E-2"
/db_xref="GeneID:253738"
/db_xref="HGNC:HGNC:19087"
/db_xref="MIM:607407"
CDS 51..1706
/gene="EBF3"
/gene_synonym="COE3"
/gene_synonym="O/E-2"
/codon_start=1
/product="early B-cell factor 3"
/protein_id="AAI30480.1"
/db_xref="GeneID:253738"
/db_xref="HGNC:HGNC:19087"
/db_xref="MIM:607407"
/translation="MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQ
SGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNE
KTNNGIHYKLQLLYSNGVRTEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIM
CSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTT
VNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTTGGATVIIIG
DNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRF
VYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEII
LKRAADIAEALYSVPRNHNQIPTLGNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVG
YSRNTSSVSPRGYVPSSTPQQSNYNTVSTSMNGYGSGAMASLGVPGSPGFLNGSSANS
PYGMKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM"
BASE COUNT 422 a 506 c 477 g 330 t
ORIGIN
1 ctcgaggaaa cgctttcggc cgggagctgc ggccgccgcc agcagttttc atgtttggga
61 ttcaggagaa tattccgcgc ggggggacga ccatgaagga ggagccgctg ggcagcggca
121 tgaacccggt gcgctcgtgg atgcacacgg cgggcgtggt ggacgccaac acggccgccc
181 agagcggcgt ggggctggcg cgggcgcact tcgagaagca gccgccttcc aacctccgga
241 aatccaattt cttccacttc gtgctggcgc tctacgatag gcaggggcag ccggtggaga
301 ttgaaaggac cgcttttgtg gactttgtgg agaaagagaa agagccaaac aacgagaaaa
361 ccaacaacgg catccactat aaactccagt tattgtacag caacggagtc agaacagagc
421 aagatctgta tgttcgcctc atagattcaa tgaccaaaca ggccatcgtc tacgagggcc
481 aggacaagaa cccggagatg tgccgtgtgc tgctgaccca cgagatcatg tgcagccggt
541 gctgtgacaa gaaaagttgt ggcaatagaa acgaaacgcc ctcagaccct gtaatcattg
601 acagattctt tctaaagttt ttcctcaagt gcaatcagaa ctgtttgaag aatgcaggca
661 accctcgaga tatgcggaga ttccaggttg ttgtatcgac aacagtcaac gtggacggcc
721 acgtgctggc cgtgtcagac aacatgtttg tgcacaacaa ttccaaacac gggaggcggg
781 cccgccgcct agacccgtca gaagccactc cgtgcatcaa ggccatcagt cccagtgaag
841 gctggaccac ggggggtgcc accgtcatca taattggcga caacttcttt gacgggctgc
901 aagttgtatt cggaactatg ttggtgtgga gcgagctgat aactccccat gccatccgag
961 tccagacccc gccgaggcac attcctggcg tcgtcgaagt gaccctctcc tacaaatcca
1021 agcagttctg caaaggtgct cctgggcgct ttgtctacac cgcccttaat gaaccaacca
1081 tagattacgg ctttcagagg ttgcagaaag tgatcccaag acatccgggt gatcccgaaa
1141 ggttacccaa ggaggtgtta ctgaagcggg cggcggacct ggtggaagcc ttatacggaa
1201 tgcctcacaa caaccaggag atcatcttga agcgagcggc ggacatcgcc gaggcgctgt
1261 acagcgttcc ccgcaatcac aaccagatcc ccaccctggg caacaaccct gcacacacgg
1321 gcatgatggg cgtcaactcc ttcagcagcc agctagccgt caacgtgtca gagacgtcac
1381 aagccaacga ccaagtcggc tacagtcgca atacaagcag cgtgtccccg cgaggctacg
1441 tccccagcag tactccccag cagtccaatt acaacacagt cagcactagc atgaatggat
1501 atggaagtgg cgccatggcc agtctagggg tccctggctc gcctggattt cttaatggct
1561 cctccgctaa ctctccctac ggcatgaaac agaagagcgc cttcgcgccc gtggtccggc
1621 cccaagcctc tcctcctcct tcctgcacca gcgccaacgg gaatggactg caagctatgt
1681 ctgggctggt agtcccgcca atgtgaggga cttctgttta ccttccgcag caccc
//