LOCUS BC130438 1836 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens arylsulfatase E (chondrodysplasia punctata 1), mRNA
(cDNA clone MGC:163310 IMAGE:40146469), complete cds.
ACCESSION BC130438
VERSION BC130438.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1836)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1836)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: G Column: 21.
FEATURES Location/Qualifiers
source 1..1836
/db_xref="H-InvDB:HIT000390228"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163310 IMAGE:40146469"
/tissue_type="Colon, PCR rescued clones"
/clone_lib="NIH_MGC_295"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCCCTCT"
gene 1..1836
/gene="ARSE"
/gene_synonym="CDPXR"
/db_xref="GeneID:415"
/db_xref="HGNC:HGNC:719"
/db_xref="MIM:300180"
CDS 46..1815
/gene="ARSE"
/gene_synonym="CDPXR"
/codon_start=1
/product="arylsulfatase E (chondrodysplasia punctata 1)"
/protein_id="AAI30439.1"
/db_xref="GeneID:415"
/db_xref="HGNC:HGNC:719"
/db_xref="MIM:300180"
/translation="MLHLHHSCLCFRSWLPAMLAVLLSLAPSASSDISASRPNILLLM
ADDLGIGDVGCYGNNTMRTPNIDRLAEDGVKLTQHISAASLCTPSRAAFLTGRYPVRS
GMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYATGLIGKWHLGLNCESASDHCH
HPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNFLFQVLALVALTLVAGKLTH
LIPVSWMPVIWSALSAVLLLASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTPLIL
QEVASFLKRNKHGPFLLFVSFLHVHIPLITMENFLGKSLHGLYGDNVEEMDWMVGRIL
DTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQYGGWNGIYKGGKGMGGWEGGIRVPGI
FRWPGVLPAGRVIGEPTSLMDVFPTVVRLAGGEVPQDRVIDGQDLLPLLLGTAQHSDH
EFLMHYCERFLHAARWHQRDRGTMWKVHFVTPVFQPEGAGACYGRKVCPCFGEKVVHH
DPPLLFDLSRDPSETHILTPASEPVFYQVMERVQQAVWEHQRTLSPVPLQLDRLGNIW
RPWLQPCCGPFPLCWCLREDDPQ"
BASE COUNT 402 a 509 c 502 g 423 t
ORIGIN
1 ttcaggaagg agcccaggag cagaggaagt agagagagag acaacatgtt acatctgcac
61 cattcttgtt tgtgtttcag gagctggctg ccagcgatgc tcgctgtact gctaagtttg
121 gcgccatcag cttccagcga catttccgcc tcccgaccga acatccttct tctgatggcg
181 gacgaccttg gcattgggga cgttggctgc tatggcaaca acaccatgag gactccgaat
241 attgaccgcc ttgcagagga cggcgtgaag ctgacccaac acatctctgc cgcatctttg
301 tgcaccccaa gcagagccgc cttcctcacg ggcagatacc ctgtgcgatc agggatggtt
361 tccagcattg gttaccgtgt tcttcagtgg accggagcat ctggaggtct tccaacaaat
421 gagacaactt ttgcaaaaat actgaaagag aaaggctatg ccactggact cattggaaaa
481 tggcatctgg gtctcaactg tgagtcagcc agtgatcatt gccaccaccc tctccatcat
541 ggctttgacc atttctacgg aatgcctttc tccttgatgg gtgattgcgc ccgctgggaa
601 ctctcagaga agcgtgtcaa cctggaacaa aaactcaact tcctcttcca agtcctggcc
661 ttggttgccc tcacactggt agcagggaag ctcacacacc tgatacccgt ctcgtggatg
721 ccggtcatct ggtcagccct ttcggccgtc ctcctcctcg caagctccta ttttgtgggt
781 gctctgattg tccatgccga ttgctttctg atgagaaacc acaccatcac ggagcagccc
841 atgtgcttcc aaagaacgac accccttatt ctgcaggagg ttgcgtcctt tctcaaaagg
901 aataagcatg ggcctttcct cctctttgtt tcctttctac acgttcacat ccctcttatc
961 actatggaga acttcctcgg gaagagtctc cacgggctgt atggggacaa cgtagaggag
1021 atggactgga tggtaggacg gatccttgac actttggacg tggagggttt gagcaacagc
1081 accctcattt attttacgtc ggatcacggc ggttccctag agaatcaact tggaaacacc
1141 cagtatggtg gctggaatgg aatttataaa ggtgggaagg gcatgggagg atgggaaggt
1201 gggatccgcg tgcccgggat cttccgctgg cccggggtgc tcccggccgg ccgagtgatt
1261 ggcgagccca cgagtctgat ggacgtgttc cccaccgtgg tccggctggc gggcggcgag
1321 gtgccccagg acagagtgat tgacggccaa gaccttctgc ccttgctcct ggggacagcc
1381 caacactcag accacgagtt cctgatgcat tattgtgaga ggtttctgca cgcagccagg
1441 tggcatcaac gggacagagg aacaatgtgg aaagtccact ttgtgacgcc tgtgttccag
1501 ccagagggag ccggtgcctg ctatggaaga aaggtctgcc cgtgctttgg ggaaaaagta
1561 gtccaccacg atccaccttt gctctttgac ctctcaagag acccttctga gacccacatc
1621 ctcacaccag cctcagagcc cgtgttctat caggtgatgg aacgagtcca gcaggcggtg
1681 tgggaacacc agcggacact cagcccagtt cctctgcagc tggacaggct gggcaacatc
1741 tggagaccgt ggctgcagcc ctgctgtggc ccgttccccc tctgctggtg ccttagggaa
1801 gatgacccac aataaatgtc tgcagtgaaa agctgg
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