LOCUS BC130427 1144 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens pleckstrin homology-like domain, family A, member 1,
mRNA (cDNA clone IMAGE:40146458), partial cds.
ACCESSION BC130427
VERSION BC130427.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1144)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1144)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: G Column: 10.
FEATURES Location/Qualifiers
source 1..1144
/db_xref="H-InvDB:HIT000390217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40146458"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTTTTACA"
gene <1..1144
/gene="PHLDA1"
/gene_synonym="DT1P1B11"
/gene_synonym="PHRIP"
/gene_synonym="TDAG51"
/db_xref="GeneID:22822"
/db_xref="HGNC:HGNC:8933"
/db_xref="MIM:605335"
CDS <1..940
/gene="PHLDA1"
/gene_synonym="DT1P1B11"
/gene_synonym="PHRIP"
/gene_synonym="TDAG51"
/codon_start=2
/product="PHLDA1 protein"
/protein_id="AAI30428.1"
/db_xref="GeneID:22822"
/db_xref="HGNC:HGNC:8933"
/db_xref="MIM:605335"
/translation="LCLLRVSLLCALRAGGRGSRWGEDGARLLLLPPARAAGNGEAEP
SGGPSYAGRMLESSGCKALKEGVLEKRSDGLLQLWKKKCCILTEEGLLLIPPKQLQHQ
QQQQQQQQQQQQQPGQGPAEPSQPSGPAVASLEPPVKLKELHFSNMKTVDCVERKGKY
MYFTVVMAEGKEIDFRCPQDQGWNAEITLQMVQYKNRQAILAVKSTRQKQQHLVQQQP
PSQPQPQPQLQPQPQPQPQPQPQPQSQPQPQPQPKPQPQQLHPYPHPHPHPHSHPHSH
PHPHPHPHPHQIPHPHPQPHSQPHGHRLLRSTSNSA"
BASE COUNT 256 a 403 c 311 g 174 t
ORIGIN
1 gctctgcctc ctgcgtgtta gcctcctctg cgcgctccgg gcaggcggcc gtgggagccg
61 ctggggcgag gacggcgcga ggctgctgct gctgcccccg gcccgcgcgg ctggaaacgg
121 agaggccgag ccaagcggcg gcccctctta tgctgggagg atgctggaga gtagcggctg
181 caaagcgctg aaggagggcg tgctggagaa gcgcagcgac gggttgttgc agctctggaa
241 gaaaaagtgt tgcatcctca ccgaggaagg gctgctgctt atcccgccca agcagctgca
301 acaccagcag cagcagcaac agcagcagca gcagcagcaa caacagcccg ggcaggggcc
361 ggccgagccg tcccaaccca gtggccccgc tgtcgccagc ctcgagccgc cggtcaagct
421 caaggaactg cacttctcca acatgaagac cgtggactgt gtggagcgca agggcaagta
481 catgtacttc actgtggtga tggcagaggg caaggagatc gactttcggt gcccgcaaga
541 ccagggctgg aacgccgaga tcacgctgca gatggtgcag tacaagaatc gtcaggccat
601 cctggcggtc aaatccacgc ggcagaagca gcagcacctg gtccagcagc agcccccctc
661 gcagccgcag ccgcagccgc agctccagcc ccaaccccag cctcagcctc agccgcaacc
721 ccagccccaa tcacaacccc agcctcagcc ccaacccaag cctcagcccc agcagctcca
781 cccgtatccg catccacatc cacatccaca ctctcatcct cactcgcacc cacaccctca
841 cccgcacccg catccgcacc aaataccgca cccacaccca cagccgcact cgcagccgca
901 cgggcaccgg cttctccgca gcacctccaa ctctgcctga aaggggcagc tcccgggcaa
961 gacaaggttt tgaggacttg aggaagtggg acgagcacat ttctattgtc ttcacttgga
1021 tcaaaagcaa aacagtctct ccgccccgca ccagatcaag tagtttggac atcaccctac
1081 tgaaaacttg cgattcttct tagttttctg catacttttc atcacgatgc aggaaacgat
1141 ttcg
//