LOCUS BC130421 1697 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens fibronectin type III domain containing 7, mRNA (cDNA
clone MGC:163293 IMAGE:40146452), complete cds.
ACCESSION BC130421
VERSION BC130421.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1697)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: G Column: 4.
FEATURES Location/Qualifiers
source 1..1697
/db_xref="H-InvDB:HIT000390211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163293 IMAGE:40146452"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CTACTAAC"
gene 1..1697
/gene="FNDC7"
/gene_synonym="RP11-293A10.2"
/db_xref="GeneID:163479"
/db_xref="HGNC:HGNC:26668"
CDS 26..1528
/gene="FNDC7"
/gene_synonym="RP11-293A10.2"
/codon_start=1
/product="fibronectin type III domain containing 7"
/protein_id="AAI30422.1"
/db_xref="GeneID:163479"
/db_xref="HGNC:HGNC:26668"
/translation="MALSDSSELTCSTTFSSCTISSLQCGTEYLISVLASNDAGSSKS
SSAMTLKTVACAPGRVTIQEDPPGHLSVAWSSVDLGDYYVVFVKSDDGLEVHCNTSLT
QCNFLSECGFTYFISVFVYNKAGQSPLGDIFNYTTAPCCPSDINPVLVSSDRVEIVWS
PVRGAELYETKAVDGYNMVECNDTTPACTLSALECDTKYNITVYSFNEVRGSNMSCTP
QFITTAPCSPEIKNVSRDAFSMINVHWRSTNDDATYTVTAQGEKGLYQCSSTGESCTM
RGLPCGSVFSVTAVAETQAGRSLPSYSVPLETVPCCPTGLTVTQITQSVINVSWTIGR
VAQTHVAVLESHTGQSKCHTHQNHCLLGCITCGINYTVTLKAISATGLTADCSYQSYF
SGACCPLGVKLYRLGPNGIRIYWQASRGSANYSTDLYGSKGIFTCTPSAGLSFCDVTE
IPCGDVYTVMVSPVAKTGLKLTFCPKKIYSVTCSGSTLGMVIYRGKRNEE"
BASE COUNT 450 a 394 c 401 g 452 t
ORIGIN
1 agaaggagct ttcaattata ctgtgatggc tttgagcgac tcttcagagc tgacctgcag
61 tacaactttc agttcctgca ccatctcttc cctccagtgt ggaactgaat acttgatttc
121 agttttagca agtaatgatg ctggatctag caaatcatct tcagcaatga ccctgaaaac
181 tgttgcttgt gcacccggaa gagtgacgat ccaagaagat ccccctggcc acctgtctgt
241 ggcttggtcc agtgtagatc tgggtgacta ctatgtggtc tttgtgaaga gtgatgatgg
301 cttggaagta cactgcaaca catctctcac tcagtgcaac ttcttatctg agtgtggctt
361 cacttatttt attagtgttt ttgtctataa caaggcaggg caaagtcctt tgggtgacat
421 attcaattat accacagctc cctgttgtcc tagtgacatt aaccccgtgt tggtgtccag
481 tgacagagtt gagattgtct ggtctcctgt ccgtggtgcc gaactgtatg aaaccaaggc
541 tgtagatggg tacaacatgg ttgagtgcaa tgacactact cctgcgtgca ccctttcggc
601 tctagagtgt gacaccaagt acaacatcac agtgtattca ttcaatgaag tccgaggcag
661 caatatgtca tgtactcccc agttcataac cacagctcct tgcagtcctg aaataaaaaa
721 tgtttcaagg gatgcattct ccatgattaa tgtgcactgg cgatccacta atgatgatgc
781 tacttacacg gtgactgccc aaggggagaa aggactgtat cagtgcagca gcacaggaga
841 gtcctgcacc atgcggggct tgccctgtgg ctcagtgttc tctgtcactg ctgtggccga
901 aacacaggca ggacggagcc tgcccagcta cagtgtgccc ctggaaacag tgccatgctg
961 tccaaccggt ctgacagtaa ctcaaatcac ccagtcagta atcaacgtga gctggactat
1021 tgggagagtg gctcaaaccc atgttgcagt tctggagtca cacactggac agtctaagtg
1081 tcacactcat caaaaccact gcctcctagg gtgcatcaca tgtggcatca attacacagt
1141 gacattaaaa gcaattagtg ccaccgggtt gactgcagat tgctcctacc aaagttattt
1201 ctctggtgcc tgctgccctt tgggggtgaa attatatagg ctgggcccta atggcatccg
1261 gatctactgg caagcctcca ggggctctgc caattacagc actgacctct atggctccaa
1321 aggcattttc acgtgcaccc cgagtgctgg cctcagtttc tgtgatgtca ctgagatacc
1381 ctgtggggat gtatacactg tgatggtctc accagttgct aaaacaggat tgaagcttac
1441 tttctgtcca aaaaaaatat attcagtaac ttgctctgga agtacacttg gaatggtgat
1501 ttatagaggg aagagaaatg aagaatgaca aagtgagccc cagataaaaa caaaaacttg
1561 accaaagttg tctcatttgt tagtgattag agatggaaaa gatctactag aatgtagaat
1621 aaaaatgcct ctaggatagg aaaagctcct ttggccttta gaagaacaac tctgactctg
1681 cttcctgagg gcaaggt
//