LOCUS BC130398 3073 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens ubiquitin specific peptidase 29, mRNA (cDNA clone
MGC:163270 IMAGE:40146429), complete cds.
ACCESSION BC130398
VERSION BC130398.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3073)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3073)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: F Column: 5.
FEATURES Location/Qualifiers
source 1..3073
/db_xref="H-InvDB:HIT000390188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163270 IMAGE:40146429"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGTATTCA"
gene 1..3073
/gene="USP29"
/gene_synonym="HOM-TES-84/86"
/db_xref="GeneID:57663"
/db_xref="HGNC:HGNC:18563"
/db_xref="MIM:609546"
CDS 117..2855
/gene="USP29"
/gene_synonym="HOM-TES-84/86"
/codon_start=1
/product="USP29 protein"
/protein_id="AAI30399.1"
/db_xref="GeneID:57663"
/db_xref="HGNC:HGNC:18563"
/db_xref="MIM:609546"
/translation="MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKS
GKFIRIFQLSNNIRSVVLRHCKKRQSHLRLTLKNNVFLFIDKLSYRDAKQLNMFLDII
HQNKSQQPMKSDDDWSVFESRNMLKEIDKTSFYSICNKPSYQKMPLFMSKSPTHVKKG
ILENQGGKGQNTLSSDVQTNEDILKEDNPVPNKKYKTDSLKYIQSNRKNPSSLEDLEK
DRDLKLGPSFNTNCNGNPNLDETVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPL
DSHSQQLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQ
LLALKDFCSTKIKRELLGNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLN
ATLNTGKECGDENSSPQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEP
NNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLI
IHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPLPLSSSAPVGKCEVLEVS
QEMISEINSPLTPSMKLTSESSDSLVLPVEPDKNADLQRFQRDCGDASQEQHQRDLEN
GSALESELVHFRDRAIGEKELPVADSLMDQGDISLPVMYEDGGKLISSPDTRLVEVHL
QEVPQHPELQKYEKTNTFVEFNFDSVTESTNGFYDCKENRIPEGSQGMAEQLQQCIEE
SIIDEFLQQAPPPGVRKLDAQEHTEETLNQSTELRLQKADLNHLGALGSDNPGNKNIL
DAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGHYISDVYDFQKQAWFTY
NDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRLPSTQAGVIPQGE"
BASE COUNT 997 a 630 c 658 g 788 t
ORIGIN
1 aacagccgtg gcagtcagag ctctgcctgc agtgtgacca tggacagctc tccaaagctt
61 aaacttcagt aaattgactc aagtttcttc ggaaagaact gttacataaa gaaaggatga
121 tatctctaaa ggtatgtgga ttcatccaaa tttggagcca gaagactggg atgactaagc
181 tgaaagaagc tctcattgaa acagtgcaaa gacaaaagga aattaaactg gtggtcactt
241 tcaaatctgg aaaatttata agaatttttc agctgagcaa caacattaga agtgtggtcc
301 ttagacattg taaaaaaaga caaagtcacc tgcgtttaac tttgaaaaac aacgtgttct
361 tgtttattga caaattatcc tacagagatg ctaaacagtt gaatatgttc ctggacataa
421 tccaccaaaa caaatctcag caacccatga aatctgatga tgattggagt gtgtttgaaa
481 gcaggaatat gctgaaggaa attgacaaaa cttcatttta cagcatttgt aacaagccaa
541 gttatcagaa gatgcctttg tttatgtcaa aatcaccaac acatgtgaaa aaggggatat
601 tagaaaatca aggtgggaag gggcaaaaca cactatcatc tgatgtacag acaaatgagg
661 acattctgaa ggaagataac cctgtaccaa acaagaaata taagacagat tccttgaaat
721 atatacaaag caataggaag aacccatcaa gtttagagga tttagaaaaa gatagagatt
781 tgaaactcgg gccttcattc aataccaact gtaatggaaa tcctaaccta gatgagactg
841 ttcttgcaac ccagactctc aatgccaaaa atggtttgac atctccattg gaaccagagc
901 acagccaggg tgacccaaga tgcaacaaag cccaggtgcc tcttgactct cattcacagc
961 aactgcagca ggggttcccc aatttgggaa acacctgtta catgaatgca gttttacaat
1021 cgctatttgc aattccatct tttgctgatg acttactcac tcaaggtgtc ccatgggaat
1081 atattccctt tgaggctctt attatgacct tgacccagct gcttgctttg aaagatttct
1141 gtagtacaaa gatcaagaga gaattacttg ggaatgttaa aaaagtcatt tcagcagttg
1201 cagaaatatt ttctggcaac atgcagaatg atgctcatga gtttttaggt cagtgtttag
1261 accagctgaa agaagacatg gaaaaattaa atgccacttt gaatactggg aaagaatgtg
1321 gggatgaaaa ttcatctcca caaatgcatg ttggtagtgc tgccaccaaa gtgtttgttt
1381 gccctgttgt tgctaatttt gagtttgaat tgcagctctc ccttatttgt aaagcttgtg
1441 gtcatgctgt tctcaaggta gaacctaata attatctctc catcaacctg caccaagaaa
1501 caaaaccact tcctttgtcc attcagaatt ctttagatct tttctttaaa gaagaagagc
1561 ttgaatataa ctgtcagatg tgtaagcaga agagttgtgt tgcaaggcat acatttagta
1621 ggctctccag ggtccttatc attcatctga aacgctatag cttcaacaat gcttggttgc
1681 tggtgaagaa taacgagcaa gtttatattc ccaaatcttt aagtttatct tcttattgca
1741 atgaaagcac caaaccacct cttcccttga gcagtagtgc acctgttggg aaatgtgaag
1801 tcctggaagt ctctcaggag atgatttctg agatcaacag cccattgaca ccatcaatga
1861 agctgacctc agaatccagt gattccctgg ttctacccgt tgaaccagac aagaatgccg
1921 acctacaaag attccagaga gactgtggag atgcaagcca agagcagcat cagagagacc
1981 tggaaaatgg ctctgcacta gagtcagaat tggtccactt tagagatagg gcaatcggtg
2041 aaaaggagct tccagtggct gactcactga tggaccaggg agacatttct cttcctgtga
2101 tgtatgaaga tggagggaag ctgatcagca gcccagacac aaggcttgtc gaggttcatc
2161 ttcaagaggt gcctcaacat ccagaacttc agaagtatga gaaaaccaat acattcgtag
2221 agttcaattt tgacagtgtc actgagtcca ccaatggctt ttatgactgt aaagaaaaca
2281 ggattccaga aggatctcaa ggaatggctg aacagctcca gcagtgtatt gaggagagca
2341 tcatagatga atttcttcag caggcaccac ctccaggtgt taggaagctg gatgcccagg
2401 aacatacaga agagaccctc aatcagtcta cagaattaag acttcaaaag gctgacctga
2461 atcaccttgg ggcactgggt tctgacaacc caggaaacaa aaacatttta gatgcagaga
2521 acacaagagg tgaagccaag gaactaacaa gaaacgtgaa gatgggggat cctctccagg
2581 cctacagact catcagtgtt gtcagccata tcgggagctc cccaaattca ggccattaca
2641 tcagcgatgt gtatgacttt cagaagcagg cctggttcac atacaacgat ctatgtgtat
2701 cagaaatctc agagaccaaa atgcaggagg cgaggcttca ctctgggtat atcttctttt
2761 acatgcacaa tgggattttt gaggagctgt taagaaaagc agagaactct cggctaccta
2821 gcacacaggc aggggtgatc cctcaggggg aataagaagg tgactctttg tacagacctg
2881 cttgacagac tcactcggcc tcacttcatc cttgcaaaga gaatcctgta cttcatcctt
2941 gcaaagagaa tcctgtactt cactcagaat gaaggaacaa gtatctcagg atgaaatctc
3001 aatgaaaaac acttattttg ggggaatatc tattttaact gcttcagaca cctagatccc
3061 agaactcagg cgc
//