LOCUS BC130385 3938 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone MGC:163257 IMAGE:40146416), complete cds.
ACCESSION BC130385
VERSION BC130385.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3938)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3938)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: E Column: 16.
FEATURES Location/Qualifiers
source 1..3938
/db_xref="H-InvDB:HIT000390175"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163257 IMAGE:40146416"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CTCACCTA"
gene 1..3938
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 135..3728
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="structural maintenance of chromosomes 2"
/protein_id="AAI30386.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEIEELEKRKDKETGGILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKEL
EKNMVEDSKTLAAKEKEVKKITDGLHALQEASNKDAEALAAAQQHFNAVSAGLSSNED
GAEATLAGQMMACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSGYRKDQEA
LEAVKRLKEKLEAEMKKLNYEENKEESLLEKRRQLSRDIGRLKETYEALLARFPNLRF
AYKDPEKNWNRNCVKGLVASLISVKDTSATTALELVAGERLYNVVVDTEVTGKKLLER
GELKRRYTIIPLNKISARCIAPETLRVAQNLVGPDNVHVALSLVEYKPELQKAMEFVF
GTTFVCDNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQELK
DVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHK
QQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERERELKDAQKKL
DCAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEV
MAAEVAKNKESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELD
HNISKHKREAEDGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNPKEAGQRLQKL
QEMKEKLGRNVNMRAMNVLTEAEERYNDLMKKKRIVENDKSKILTTIEDLDQKKNQAL
NIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWKENLTELSGG
QRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQFIVVSLK
EGMFNNANVLFKTKFVDGVSTVARFTQCQNGKISKEAKSKAKPPKGAHVEV"
BASE COUNT 1433 a 669 c 855 g 981 t
ORIGIN
1 gttccctgcc tttgtgaccc ggaggagctt ttggggtgcg tcaagcccct ggcctgaggc
61 agcggtgagg cgtaactggt ttgtggcctg tttgattcct gtcagaggtt tgctgaccca
121 agacagtatc gaaaatgcat attaagtcaa ttattctaga gggattcaag tcctatgctc
181 agaggaccga agtcaatggt tttgaccccc tcttcaatgc tatcactggc ttaaatggta
241 gtgggaaatc caacatattg gactccatct gctttttgct gggcatctcc aacctgtctc
301 aggttcgggc ttctaattta caagatttag tttacaaaaa tgggcaggct ggtattacca
361 aagcctctgt gtcaatcact tttgataatt ctgacaaaaa gcaaagtcct ttaggatttg
421 aggttcatga tgaaatcaca gtaacaaggc aggtggttat tggtggtaga aataaatatt
481 taatcaatgg agtcaatgcc aacaacacca gagtacagga tctcttctgt tctgttggcc
541 ttaatgttaa caaccctcac tttctcatca tgcagggccg aattacaaaa gtattgaata
601 tgaaacctcc agagatttta tccatgatag aagaagcagc tggaaccagg atgtatgaat
661 acaaaaaaat agctgcacag aaaactatag aaaaaaagga ggctaagctg aaagaaatta
721 agacgatact tgaagaagag attactccaa ccattcaaaa attaaaagag gaaagatcgt
781 cctacttgga gtaccaaaaa gtaatgagag aaatagaaca tttgagtcgt ttatatattg
841 cttatcagtt tttgctggct gaagatacca aagtacgctc agctgaggaa ttaaaagaaa
901 tgcaagataa agttataaag cttcaggaag aattgtctga gaatgataaa aaaataaaag
961 cacttaatca tgaaatagaa gaattggaaa aaagaaaaga taaggaaact ggaggtatac
1021 ttcgatcttt agaagatgct cttgcagagg ctcagcgagt taatactaaa tctcaaagcg
1081 catttgatct caagaagaaa aatctggcat gtgaggaaag caaacgcaaa gagctggaaa
1141 aaaatatggt tgaggactca aaaactttag cagcaaagga aaaagaggtt aaaaagataa
1201 cagatggact gcatgccctt caagaagcaa gtaataaaga tgctgaagct ctggcagctg
1261 cacagcagca cttcaatgct gtttccgctg gcctgtccag taatgaagat ggagcagaag
1321 caactcttgc tggtcaaatg atggcctgta aaaatgatat aagtaaagct cagacagaag
1381 ccaaacaggc tcagatgaag ttgaagcatg ctcaacagga attaaagaat aaacaagctg
1441 aagttaagaa gatggatagt ggctacagga aggatcaaga agctctagaa gctgtaaaaa
1501 gacttaaaga aaaacttgaa gctgaaatga aaaagctaaa ttatgaagaa aataaagagg
1561 aaagcctttt ggaaaagcgc aggcagctgt ctcgtgatat tggtagattg aaagaaacat
1621 atgaagctct attagccaga tttcccaatc ttcgatttgc atacaaggat ccagagaaga
1681 actggaatag aaattgtgtg aaaggacttg tggcttctct gattagtgtg aaagacactt
1741 ctgcaaccac agctttagaa ttagtggctg gagaacgact ctacaatgtt gtagtagaca
1801 cagaagttac tggtaaaaag ctactagaaa ggggggaact gaaacgtcga tacactataa
1861 ttccactcaa taaaatttca gccagatgta ttgcaccaga aactctgaga gttgctcaga
1921 atcttgttgg ccctgacaac gttcatgtgg ctctttcctt ggttgaatat aaaccagaac
1981 ttcagaaagc aatggagttt gtctttggaa caacatttgt ttgtgacaat atggataatg
2041 ccaaaaaagt ggcctttgat aagaggataa tgactagaac tgtaactctc ggaggtgatg
2101 tgtttgatcc tcatgggaca ttgagtggag gtgctcgatc ccaggcagct tccattttaa
2161 ccaagtttca agaactcaaa gatgttcagg atgaactgag aatcaaagag aatgagctgc
2221 gggctctaga agaggaatta gcaggtctta aaaacactgc tgaaaagtat cgccaactaa
2281 aacagcagtg ggagatgaaa actgaagagg cagatttatt acaaaccaag ctccagcaaa
2341 gctcatatca caagcaacaa gaagaattag atgcccttaa aaaaaccatt gaggaaagtg
2401 aggagacttt gaaaaacact aaagaaatcc aaagaaaagc agaagaaaaa tatgaagtat
2461 tggaaaataa aatgaaaaat gcagaagctg aaagagagcg agaactgaaa gatgctcaga
2521 aaaaactgga ttgtgccaaa acaaaggcag atgcatctag caagaagatg aaagaaaaac
2581 aacaggaagt tgaagctatc actctggaac tggaagagct caagagagag catacatctt
2641 acaaacaaca gcttgaagct gtaaatgaag ctatcaaatc ctatgaaagt cagattgaag
2701 taatggcagc tgaggtggct aaaaataagg agtcagtaaa taaagctcaa gaagaggtga
2761 ccaagcaaaa agaggtgata acagcccaag acactgtaat taaagctaaa tatgcagaag
2821 tggcaaaaca caaggagcaa aacaatgatt ctcagcttaa aattaaggaa ttagaccaca
2881 acatcagcaa acataaacgg gaggctgaag atggtgctgc aaaggtatcc aaaatgttga
2941 aagattatga ctggattaat gcagagagac acctctttgg ccaacccaat agtgcctatg
3001 atttcaaaac taacaaccct aaagaagctg gtcagagact tcagaagttg caagaaatga
3061 aggagaaact aggaagaaat gtcaatatga gagctatgaa tgtattgaca gaagctgaag
3121 agcgatacaa tgacttgatg aagaagaaga gaattgtaga aaatgacaaa tccaaaattc
3181 ttacaactat agaagacctt gaccagaaga aaaaccaagc cctaaatatt gcatggcaaa
3241 aggtgaacaa ggactttggg tctatttttt ctactctttt gcctggtgct aatgctatgc
3301 ttgcaccacc agagggtcaa actgttttgg atggtctgga gttcaaggtt gccttaggaa
3361 atacctggaa agaaaaccta actgaactta gtggtggtca gaggtcttta gtggccttgt
3421 cattaatact gtccatgctt ctcttcaaac ctgctccaat ttatatcctt gatgaggtag
3481 atgcagcctt ggatctttct catacccaaa acattggaca gatgctgcgt actcatttca
3541 cacattctca gttcattgtg gtgtcactaa aagaaggtat gttcaacaat gcaaacgttc
3601 ttttcaaaac caagtttgtg gatggtgttt ctacagtagc cagatttact caatgtcaaa
3661 atggaaagat ttcaaaggaa gcaaaatcca aggcaaaacc acccaaagga gcacatgtgg
3721 aagtttaaac tacaaagtta tttcttcatc ttgacctgtt tttttaaatg taaactttta
3781 aggacttgag ataactaatt tgtttatata caaaaattaa tgttactgtg ttacttaacc
3841 catgttttct ctttatataa tcacttatcg cttacaaatg agcatatatt cctcatctct
3901 taactagtct aattatggtc caattattgt ggttgtga
//