LOCUS BC130375 1784 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens copine family member IX, mRNA (cDNA clone MGC:163247
IMAGE:40146406), complete cds.
ACCESSION BC130375
VERSION BC130375.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1784)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1784)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: E Column: 6.
FEATURES Location/Qualifiers
source 1..1784
/db_xref="H-InvDB:HIT000390165"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163247 IMAGE:40146406"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TATTAACT"
gene 1..1784
/gene="CPNE9"
/gene_synonym="KIAA4217"
/db_xref="GeneID:151835"
/db_xref="HGNC:HGNC:24336"
CDS 43..1704
/gene="CPNE9"
/gene_synonym="KIAA4217"
/codon_start=1
/product="copine family member IX"
/protein_id="AAI30376.1"
/db_xref="GeneID:151835"
/db_xref="HGNC:HGNC:24336"
/translation="MSLGGASERSVPATKIEITVSCRNLLDLDTFSKSDPMVVLYTQS
RASQEWREFGRTEVIDNTLNPDFVRKFVLDYFFEEKQNLRFDVYNVDSKTNISKPKDF
LGQAFLALGEVIGGQGSRVERTLTGVPGKKCGTILLTAEELSNCRDIATMQLCANKLD
KKDFFGKSDPFLVFYRSNEDGTFTICHKTEVVKNTLNPVWQPFSIPVRALCNGDYDRT
VKIDVYDWDRDGSHDFIGEFTTSYRELSKAQNQFTVYEVLNPRKKCKKKKYVNSGTVT
LLSFSVDSEFTFVDYIKGGTQLNFTVAIDFTASNGNPLQPTSLHYMSPYQLSAYAMAL
KAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQ
SLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSAS
SLPMSIIIVGVGPAMFEAMEELDGDDVRVSSRGRYAERDIVQFVPFRDYVDRSGNQVL
SMARLAKDVLAEIPEQLLSYMRTRDIQPRPPPPANPSPIPAPEQP"
BASE COUNT 415 a 513 c 477 g 379 t
ORIGIN
1 ctggtctcgc agcctcctgc ggctctggtc gcccgaccag ccatgtctct cggcggagcc
61 tccgagcgca gcgtcccggc caccaagatt gaaattaccg tgtcctgccg gaacctgcta
121 gaccttgata ccttctccaa gtccgacccc atggtggtgc tttacacgca gagccgggcc
181 agccaggagt ggcgggagtt cggacggacc gaggtgattg ataacacgct gaacccagac
241 ttcgtgcgca aattcgtcct cgactatttc tttgaggaaa agcaaaatct gcgcttcgat
301 gtgtacaacg tggactccaa aaccaacatc tccaaaccga aggatttcct gggacaagcg
361 ttcctggccc tgggagaggt gattggaggc cagggcagcc gagtagagcg aaccctcacg
421 ggtgtaccag gcaagaagtg tgggaccata ttgctgactg cagaagagct tagcaattgt
481 cgggacattg ccaccatgca gctgtgtgca aacaagctgg acaagaagga cttctttggg
541 aaatcagacc ccttccttgt gttctacagg agcaatgagg atggcacgtt caccatctgc
601 cacaagacag aggttgtgaa aaacacgctg aatcctgtgt ggcagccctt cagcatccct
661 gtgcgggctc tgtgcaatgg agactatgac agaacggtga agattgatgt gtacgactgg
721 gaccgggatg gaagccacga tttcattggt gagttcacca ccagctaccg ggagctgagc
781 aaggcccaga accagttcac agtatatgag gttcttaacc ctcggaagaa atgtaagaag
841 aagaaatatg tcaactcagg aactgtgacg ctgctctcct tctctgtgga ctctgaattc
901 acttttgttg attacatcaa gggagggaca cagctgaact tcacagtagc cattgacttc
961 acggcttcca atgggaatcc tctgcagcct acctccctgc actacatgag tccctaccag
1021 ctcagcgcct atgccatggc cctcaaggca gtgggagaga tcatccagga ctatgacagt
1081 gataagctct tcccagctta tggctttggg gccaagctgc ccccagaggg acggatctcc
1141 caccagttcc ccctgaacaa caatgatgag gaccccaact gtgcgggcat cgagggtgtg
1201 ctggagagct atttccagag cctgcgcaca gtgcagctct atgggcccac ctactttgct
1261 cctgtcatca accaagtggc cagggctgca gccaagatct ctgatggctc ccagtactat
1321 gttctgctca tcatcactga tggggtcatc tctgacatga cgcagaccaa ggaggccatc
1381 gtcagcgcct cctcattgcc catgtctatc attatcgtcg gtgtaggacc agccatgttt
1441 gaggcaatgg aagagttgga cggtgatgat gtgcgcgtgt cctctagggg acgctacgca
1501 gagcgggaca tcgttcagtt cgtcccattc cgagactatg ttgaccggtc ggggaaccag
1561 gtgttgagca tggcccgact ggccaaggat gtgctggccg agatcccgga gcagctgctg
1621 tcctatatgc gcaccagaga catccagcct cggcccccac cccctgccaa ccccagcccg
1681 atcccagctc cagagcagcc ctgaggattc cacatatcca atgcctcaca gtctgcaagc
1741 ctgctcaccc actgcttctg ctttaagcca gaggcacctg gaac
//