LOCUS BC130334 2466 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens tripartite motif-containing 36, mRNA (cDNA clone
MGC:163206 IMAGE:40146365), complete cds.
ACCESSION BC130334
VERSION BC130334.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2466)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2466)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: C Column: 13.
FEATURES Location/Qualifiers
source 1..2466
/db_xref="H-InvDB:HIT000390124"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163206 IMAGE:40146365"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCAAAATA"
gene 1..2466
/gene="TRIM36"
/gene_synonym="HAPRIN"
/gene_synonym="RBCC728"
/gene_synonym="RNF98"
/db_xref="GeneID:55521"
/db_xref="HGNC:HGNC:16280"
/db_xref="MIM:609317"
CDS 179..2365
/gene="TRIM36"
/gene_synonym="HAPRIN"
/gene_synonym="RBCC728"
/gene_synonym="RNF98"
/codon_start=1
/product="tripartite motif-containing 36"
/protein_id="AAI30335.1"
/db_xref="GeneID:55521"
/db_xref="HGNC:HGNC:16280"
/db_xref="MIM:609317"
/translation="MSESGEMSEFGYIMELIAKGKVTIKNIERELICPACKELFTHPL
ILPCQHSICHKCVKELLLTLDDSFNDVGSDNSNQSSPRLRLPSPSMDKIDRINRPGWK
RNSLTPRTTVFPCPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLC
KPPPQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETE
RINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKS
QISELNLLMKETECNGERAKEEAITHFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQT
QMEEYQGLLENNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATESLKSFRPAAQTS
FEDYVVNTSKQTELLGELSFFSSGIDVPEINEEQSRVYNNALINWHHPEKDKADSYVL
EYRKINRDDEMSWNEIEVCGTSKIIQDLENSSTYAFRVRAYKGSICSPCSRELILHTP
PAPVFSFLFDEKCGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYYTSLDYIIGD
TGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSED
ACFDSSQPFTLVTIGMQKFFIPKSPTSSNEPENRVLPMPTSIGIFLDCDKGKVNFYDM
DQMKCLYERQVDCSHTLYPAFALMGSGGIQLEEPITAKYLEYQEDM"
BASE COUNT 790 a 497 c 535 g 644 t
ORIGIN
1 gccttcattt cacccaagcc cgcttcttgc tttccccggc gcttcccctc ttttcctggt
61 taacagctta tgggcgggga gctcggcaaa actcagacta aaaacagaaa aagagaaaag
121 aaaggacaaa ttcgatacac ccgcgtcggt cctccagagt ttgtgaaggg gtgtaaacat
181 gtcggagtct ggggagatga gtgaatttgg ctacatcatg gaattgatag ctaaaggcaa
241 ggttaccatt aagaatatcg aaagggagct catttgccca gcatgcaagg agctgtttac
301 ccacccattg attctccctt gccaacatag tatctgtcat aaatgtgtaa aagaactcct
361 gctgactctc gatgattcat tcaacgatgt gggatcagac aactccaatc aaagcagtcc
421 tcgacttcgg ctcccctccc ctagtatgga taaaattgac cgaattaaca gaccaggctg
481 gaagcgcaat tcattgaccc cgaggacaac tgttttccct tgccctggct gtgagcatga
541 tgtggatctt ggagaacgag gaatcaatgg tctgtttcga aacttcactt tggaaactat
601 tgtggaaaga tatcgtcaag cagctagggc agccacagcc attatgtgtg acctttgtaa
661 accaccacct caagaatcca caaaaagctg catggactgt agtgcaagtt actgcaatga
721 atgcttcaaa attcatcacc cttggggtac tataaaagct caacatgagt atgttggtcc
781 aactactaac ttcagaccca agattttaat gtgcccagaa catgaaacag agagaataaa
841 catgtactgt gaattatgta ggaggccagt ttgccatctg tgtaagttgg gtggtaatca
901 tgccaaccac cgtgtaacca ctatgagcag tgcctacaaa accttaaagg aaaagctttc
961 aaaggatatt gattacctta ttggtaagga aagccaggtg aagagtcaaa tatctgaact
1021 aaacttgtta atgaaagaaa cagagtgtaa tggagagagg gctaaagaag aagcaattac
1081 acattttgaa aagctctttg aagttctgga agagaggaaa tcatctgttt tgaaagcaat
1141 tgactcctct aagaaactaa gattagacaa atttcagact caaatggaag agtaccaggg
1201 acttctagag aacaatggac ttgtgggata tgctcaagaa gtgctaaagg agacagatca
1261 gtcttgcttt gtgcagacag caaagcagct ccacctcaga atacagaaag ccacagaatc
1321 tttgaagagc tttagacctg cagctcagac ttcttttgaa gactatgttg ttaatacctc
1381 taaacaaaca gaacttcttg gagaattatc ctttttctct agtggcatag acgtgccaga
1441 gatcaatgag gaacagagca gagtttataa caatgccttg ataaattggc accatccaga
1501 aaaggataaa gctgatagct atgttcttga atatcggaaa atcaatagag atgatgaaat
1561 gtcatggaat gagatagaag tgtgtggaac aagtaaaata attcaagact tggaaaacag
1621 tagtacctat gctttcagag taagagctta caagggttca atctgtagtc cttgcagcag
1681 agaattgatt cttcatactc ctccagctcc agttttcagc ttcctctttg atgaaaaatg
1741 tggctataat aatgaacacc tcctgctgaa cttgaagaga gaccgtgtag agagtagagc
1801 tggatttaat cttctgcttg ctgcagaacg catccaagtg ggttattaca caagcttaga
1861 ctacatcatt ggagatactg gcattacaaa aggaaaacac ttctgggcct tccgtgtgga
1921 accatattca tacctggtaa aagtgggagt tgcttctagc gataaactac aagaatggct
1981 ccgttctccc cgggatgcag ttagtccaag atatgagcaa gacagtgggc atgacagtgg
2041 aagtgaggat gcctgttttg attcttcaca accatttacc ttagttacta taggcatgca
2101 gaaatttttt atacccaagt cacctacttc ttctaatgaa cctgaaaata gagttctccc
2161 tatgccaaca agtattggga ttttccttga ctgtgataaa ggcaaagtaa atttctatga
2221 tatggatcag atgaaatgcc tttatgaacg ccaagtggac tgttcacata cactgtatcc
2281 agcatttgca ttaatgggca gtggaggaat tcagcttgaa gaacccatca cagcaaaata
2341 tctggaatac caagaggaca tgtagttgaa acatctgatg tgactcagga taaaaactgt
2401 aaacaaagca atgccttagc gttaaccttc gtaactaatt acatatcgct gagtgttctg
2461 tcaccc
//