LOCUS BC130316 656 bp mRNA linear HUM 01-FEB-2007
DEFINITION Homo sapiens interleukin 28B (interferon, lambda 3), mRNA (cDNA
clone MGC:163188 IMAGE:40146347), complete cds.
ACCESSION BC130316
VERSION BC130316.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 656)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 656)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 8 Row: B Column: 19.
FEATURES Location/Qualifiers
source 1..656
/db_xref="H-InvDB:HIT000390106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:163188 IMAGE:40146347"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTTCGCAT"
gene 1..656
/gene="IL28B"
/gene_synonym="IFNL3"
/gene_synonym="IL-28B"
/gene_synonym="IL28C"
/db_xref="GeneID:282617"
/db_xref="HGNC:HGNC:18365"
/db_xref="MIM:607402"
CDS 40..630
/gene="IL28B"
/gene_synonym="IFNL3"
/gene_synonym="IL-28B"
/gene_synonym="IL28C"
/codon_start=1
/product="interleukin 28B (interferon, lambda 3)"
/protein_id="AAI30317.1"
/db_xref="GeneID:282617"
/db_xref="HGNC:HGNC:18365"
/db_xref="MIM:607402"
/translation="MTGDCMPVLVLMAAVLTVTGAVPVARLRGALPDARGCHIAQFKS
LSPQELQAFKRAKDALEESLLLKDCKCRSRLFPRTWDLRQLQVRERPVALEAELALTL
KVLEATADTDPALGDVLDQPLHTLHHILSQLRACIQPQPTAGPRTRGRLHHWLHRLQE
APKKESPGCLEASVTFNLFRLLTRDLNCVASGDLCV"
BASE COUNT 111 a 230 c 188 g 127 t
ORIGIN
1 ctgcattccc tcagctccct ttctctctgt gacacagaca tgaccgggga ctgcatgcca
61 gtgctggtgc tgatggccgc agtgctgacc gtgactggag cagttcctgt cgccaggctc
121 cgcggggctc tcccggatgc aaggggctgc cacatagccc agttcaagtc cctgtctcca
181 caggagctgc aggcctttaa gagggccaaa gatgccttag aagagtcgct tctgctgaag
241 gactgcaagt gccgctcccg cctcttcccc aggacctggg acctgaggca gctgcaggtg
301 agggagcgcc ccgtggcttt ggaggctgag ctggccctga cgctgaaggt tctggaggcc
361 accgctgaca ctgacccagc cctgggggat gtcttggacc agccccttca caccctgcac
421 catatcctct cccagctccg ggcctgtatc cagcctcagc ccacggcagg gcccaggacc
481 cggggccgcc tccaccattg gctgcaccgg ctccaggagg ccccaaaaaa ggagtcccct
541 ggctgcctcg aggcctctgt caccttcaac ctcttccgcc tcctcacgcg agacctgaat
601 tgtgttgcca gcggggacct gtgtgtctga cccttccgcc agtcatgcaa cctgag
//