LOCUS BC130275 2483 bp mRNA linear HUM 04-JAN-2007 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, mRNA (cDNA clone MGC:163147 IMAGE:40146306), complete cds. ACCESSION BC130275 VERSION BC130275.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2483) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2483) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-JAN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 8 Row: A Column: 2. FEATURES Location/Qualifiers source 1..2483 /db_xref="H-InvDB:HIT000390065" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:163147 IMAGE:40146306" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_362" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AGCGATTC" gene 1..2483 /gene="DDX27" /gene_synonym="dJ686N3.1" /gene_synonym="DKFZp667N057" /gene_synonym="HSPC259" /gene_synonym="PP3241" /gene_synonym="RHLP" /gene_synonym="Rrp3p" /db_xref="GeneID:55661" /db_xref="HGNC:HGNC:15837" CDS 51..2441 /gene="DDX27" /gene_synonym="dJ686N3.1" /gene_synonym="DKFZp667N057" /gene_synonym="HSPC259" /gene_synonym="PP3241" /gene_synonym="RHLP" /gene_synonym="Rrp3p" /codon_start=1 /product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 27" /protein_id="AAI30276.1" /db_xref="GeneID:55661" /db_xref="HGNC:HGNC:15837" /translation="MVLAQRRRGGCEKLRAGPQAVLASGSGFCDNMLADLGLIGTIGE DDEVPVEPESDSGDEEEEGPIVLGRRQKALGKNRSADFNPDFVFTEKEGTYDGSWALA DVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSGKLEKEKEAKEGSEPKEQEDLQE NDEEGSEDEASETDYSSADENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDENL SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPV LERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEA ALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMC SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDR EAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRR FKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSL VGEDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQ QSEAQINTAKRLLEKGKEAVVQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRK KFMKDAKKKGEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRGPAKKQ KQGKKSVFDEELTNTSKKALKQYRAGPSFEERKQLGLPHQRRGGNFKSKSRYKRRK" BASE COUNT 704 a 586 c 745 g 448 t ORIGIN 1 taagaggtcg aacggggagg gcggcagggg ctctggaacg gaagtgacgc atggtacttg 61 cgcaaagacg acgaggaggc tgcgaaaagt taagggccgg accgcaggct gtgctcgctt 121 ccggaagtgg cttctgcgac aacatgcttg cggacctcgg cttaatcgga accataggcg 181 aggatgacga ggtgccggtg gagcccgagt ctgactccgg ggacgaggaa gaggaggggc 241 ccattgtgct gggcagacga caaaaagctt tggggaagaa ccgcagtgct gatttcaacc 301 ctgatttcgt tttcactgag aaggagggga cgtacgatgg cagctgggcc ctggctgatg 361 tcatgagcca actcaagaag aagagggcag ccactacatt agatgagaag attgagaaag 421 ttcgaaagaa aaggaaaaca gaggataaag aagccaagtc tgggaagttg gaaaaggaga 481 aagaagcaaa ggaaggctct gaaccaaagg agcaggaaga ccttcaagag aatgatgagg 541 aaggctcaga agatgaagcc tcggagactg actactcatc agctgatgag aacatcctca 601 ccaaagcaga tacactcaaa gtaaaggatc ggaagaagaa gaagaagaaa ggacaggaag 661 caggaggatt ttttgaagat gcatctcagt acgatgaaaa cctctcgttc caggacatga 721 acctttcccg ccctcttctg aaggccatta cagccatggg cttcaagcag cccaccccga 781 tccagaaggc gtgcatacct gtgggtctat tggggaagga catctgtgcc tgtgcagcca 841 ctgggacagg taaaactgcc gcctttgccc tgcctgtttt ggagcgtctg atttataaac 901 cccgccaggc tccagtcacc cgcgtgctgg tgctagtgcc cacccgagag ctgggcatcc 961 aggtgcactc tgtcaccaga cagctggccc agttctgcaa catcaccacc tgcctggctg 1021 tgggcggctt ggatgtgaag tctcaggaag cagctcttcg ggcagcgcct gacatcctca 1081 tcgccacccc aggccggctc atcgatcacc tccacaactg cccttccttc cacctgagca 1141 gcatcgaggt gctcatcctg gacgaggctg acaggatgct ggatgagtac tttgaggagc 1201 agatgaagga gatcatccga atgtgttccc accaccgcca gaccatgctc ttctcggcca 1261 ccatgacaga cgaggtgaaa gatctggctt ctgtctcctt gaagaatcct gtccggatat 1321 ttgtgaacag caacacagat gtggctccct tcctgcggca ggagttcatc cggatccggc 1381 ctaatcgtga aggagaccgg gaagccatcg tggcagcttt gttgacgagg accttcactg 1441 accatgtgat gctgttcacg caaaccaaga agcaggccca ccgcatgcac atcctcctgg 1501 ggctcatggg gctgcaggtg ggtgagctcc atggcaactt gtcacagacg cagcggctgg 1561 aggccctccg gcgttttaag gatgaacaga ttgacatcct cgtggccact gatgtggcag 1621 cccgtggact tgacattgag ggggtcaaaa cggtaatcaa cttcacaatg cctaatacca 1681 tcaaacatta tgtccaccgg gtggggcgaa cagcacgtgc tggcagggct gggcgctcag 1741 tctctctggt gggagaagat gagcggaaga tgctgaagga gattgtaaaa gctgccaagg 1801 cccctgtgaa ggccaggata cttccccaag atgtcatcct caaattccgg gacaagattg 1861 agaaaatgga gaaagatgtg tatgcagttc tgcagctaga ggcggaggaa aaagagatgc 1921 agcagtcaga agcccagatc aatacagcaa agcggctcct ggagaagggg aaggaggcag 1981 tggtccaaga gcccgagagg agctggttcc agaccaaaga agagaggaag aaggagaaaa 2041 ttgccaaagc tctgcaggaa tttgacttgg ccttaagagg aaagaagaaa aggaagaagt 2101 ttatgaagga tgccaaaaaa aagggggaga tgacagcaga ggaaaggtct cagtttgaaa 2161 tcctcaaggc gcagatgttt gctgaacggc tagcgaagag gaatcgcaga gccaagcggg 2221 cccgagcaat gcccgaggag gagccagtga gaggtcctgc caagaagcaa aagcagggga 2281 agaaatctgt atttgatgaa gaactcacca acacaagcaa gaaggccctg aaacagtatc 2341 gagctggccc ttcctttgaa gaaaggaaac agttgggctt gccccaccag agacgaggag 2401 gaaactttaa atctaaatcc agatacaaga ggaggaagta gctgtcgtgg cctgaagaaa 2461 ttcatggggg cagcccttaa atc //