LOCUS BC129987 4466 bp mRNA linear HUM 02-JAN-2007
DEFINITION Homo sapiens chromosome 3 open reading frame 63, mRNA (cDNA clone
MGC:157727 IMAGE:40129237), complete cds.
ACCESSION BC129987
VERSION BC129987.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4466)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4466)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 9 Row: e Column: 7.
FEATURES Location/Qualifiers
source 1..4466
/db_xref="H-InvDB:HIT000390034"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:157727 IMAGE:40129237"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GGCCTTAT sequenced from
the forward primer"
gene 1..4466
/gene="C3orf63"
/gene_synonym="RAP140"
/gene_synonym="se89-1"
/db_xref="GeneID:23272"
/db_xref="HGNC:HGNC:30314"
CDS 66..3416
/gene="C3orf63"
/gene_synonym="RAP140"
/gene_synonym="se89-1"
/codon_start=1
/product="C3orf63 protein"
/protein_id="AAI29988.1"
/db_xref="GeneID:23272"
/db_xref="HGNC:HGNC:30314"
/translation="MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRI
GSNMESLLQKLDREKLVLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQE
PRSIVTSQKGSTNAAPQERHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEK
YVSEFFKRGFGSGKREFIMFPYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQL
PICKLKELFEENRKLQQFSPLSDYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSH
SLDYDKDRVKELINLIQCRKKSVGGDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNL
SENCHLYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHRLFNWLSETLANARHSDAS
LTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQPTCAKVENAQFKGTQSLLL
EVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVPIEHGFRRQQSK
SNNVEETEIHWKLIPITGGNARSPEDQLGKHGEKQTPGMKSPEEQLVCVPPQEAFPND
PRVINRQRSSDYQFPSSPFTDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERT
VLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMKRLSEFIYSKTSKAGVQEFV
DGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLERHVIPVSSSDFNNKHLLEP
LCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGDMAREPVEETTKSP
SDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYL
IKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDS
LDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEELSTPEGKWQWKVH
CKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPELDCLIRLQ
AQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSITEENLPQL
GANENLESQSDAVLTLTPLELGVGISQH"
BASE COUNT 1490 a 770 c 907 g 1299 t
ORIGIN
1 tgaggtcagc cactcgtgct tttttgccta tcaaactacc tgagaaatta gatgttgaaa
61 cagttatgag tattgatcat ctgaaacaga aaatccctcc agcactgttt tataaggaaa
121 catacttagg tccaaatgaa gttttgaaga atggaatgta ttgcagcctt tatgaagttg
181 tggaaaagac aagaattgga agtaacatgg agagtttact gcaaaaacta gacagagaaa
241 aacttgttct tgttaaacct ttgggagacc gaggatacct ttttcttctc tccccttatc
301 agatggttcc tccatatgaa tatcagactg ccaagtctcg agtcctacat gctttgtttc
361 tatttcaaga acctagaagc atagttactt cacaaaaagg ttcaaccaat gcagcaccac
421 aggagaggca tgagagcatg ccagatgtat taaaaatagc tcagttttta caattttctt
481 tgattcagtg tcgaaaggaa ttcaaaaata taagcgccat aaattttcat tctgttgttg
541 aaaagtatgt aagtgaattt tttaagcgag gttttggttc aggtaaacga gagtttatta
601 tgtttccata tgattcacga ttagatgata aaaaattctt atactcagct cccagaaata
661 aatcccatat tgatacttgt ttgcatgcct atatttttcg gcctgaagtg tatcagttac
721 ctatttgtaa attaaaagaa ctatttgaag aaaatagaaa acttcagcag tttagtccac
781 tttcagatta tgaaggtcaa gaagaagaaa tgaatggtac aaaaatgaaa tttggaaaac
841 gaaataactc aagaggtgaa gccattatat ctggaaagca aagatcatct cattctttgg
901 attatgataa ggatagagtc aaagaattga ttaatttaat tcagtgtagg aaaaagagtg
961 tgggtgggga ctcagacaca gaagatatga gaagcaaaac tgtcttgaag aggaagcttg
1021 aggatctacc tgaaaatatg agaaagctcg ccaaaaccag taatttatct gaaaattgcc
1081 atctgtatga agagtctcca cagcctattg gctcacttgg acatgatgct gacttgaggc
1141 ggcagcagca ggatacctgt aactccggca ttgctgacat ccataggctg tttaattggt
1201 tatcagaaac actagcaaat gcgcgccatt ctgatgcatc tctgacagac acagtcaaca
1261 aagccttagg attgagcact gatgatgcct atgaagagct gaggcaaaaa catgagtatg
1321 agttgaactc taccccagat aagaaagact atgagcagcc tacttgtgca aaagttgaaa
1381 atgcacagtt taagggtact cagagcttat tactagaagt tgatgcaaca tctaagtatt
1441 ctgttgctat ttctaccagc gaagtgggca ctgaccataa gctacatttg aaagaagatc
1501 caaatttaat tagcgtgaat aattttgaag attgcagttt gtgtcccagt gttcccattg
1561 aacatggatt tcgtagacaa cagtctaagt caaataatgt tgaagagact gaaatacatt
1621 ggaaactgat tccaattaca ggagggaatg caagaagccc agaagaccag ctggggaaac
1681 atggtgagaa acaaacacca ggtatgaaat caccagaaga acaactggtg tgtgtgccac
1741 cacaggaggc ctttcctaac gacccccggg taataaatag acagagaagt tctgattacc
1801 agtttccatc ctctccattt acagacacac taaagggcac cactgaggat gacgtgttga
1861 caggtcaggt ggaggagcag tgtgtgccag cagcagaggc agagccgcct gcagtgagcg
1921 aaaccacaga gaggacagtg ttaggagagt acaatctctt ttctaggaag atagaagaga
1981 ttttgaagca aaagaatgtt tcatatgtca gtacagtttc cacacctatc ttttcaacac
2041 aagagaagat gaaacggctt tccgagttca tatattctaa gacttccaaa gctggtgtgc
2101 aggagtttgt agatggtttg catgagaagc taaatactat tattattaaa gcatcagcca
2161 agggtgggaa tttgccacca gtcagtccta acgattctgg tgctaagata gcatcgaatc
2221 ctctggaaag gcatgtcata ccagtttcct caagtgactt caacaataaa catctccttg
2281 agccactgtg tagtgatcct ttgaaagata ccaactctga tgagcagcat tccacttcgg
2341 ctttaactga agtagaaatg aaccagcctc aacatgccac agagttaatg gtgacttctg
2401 atcatattgt acctggtgat atggcccggg aaccagtaga agaaacaaca aaatccccca
2461 gtgatgtaaa catttctgct caaccagctc tttcaaattt tataagccag ttagaacctg
2521 aagtatttaa tagtttggtt aaaatcatga aagacgtcca gaaaaatact gtgaaatttt
2581 atattcatga agaagaagag agtgtgctct gtaaagaaat aaaggaatat cttatcaaat
2641 taggcaatac agaatgtcat cctgaacagt ttttggaaag aagatcaaaa ttagataaac
2701 tattgattat tattcaaaat gaagacattg caggtttcat tcacaagata cctggcttgg
2761 tgactttaaa gaagctcccc tgtgttagtt ttgctggtgt tgatagcctg gatgatgtta
2821 aaaatcatac atacaatgaa ttatttgtat ctggaggttt tatcgtatct gatgaatcaa
2881 ttctaaaccc agaggttgtc acagttgaga accttaaaaa ttttttgaca ttccttgagg
2941 aacttagtac tccagaagga aaatggcaat ggaaagtcca ctgtaaattt cagaagaaac
3001 taaaggaact aggcagattg aatgctaaag ctctaagtct gttgacgctt ctgaatgtct
3061 atcagaagaa acatctggtt gaaattttgt cataccacaa ttgtgattca caaactcgaa
3121 atgctccaga attggattgc cttatcagac ttcaggctca gaacatacag caacgacaca
3181 tagtcttttt aacagagaag aacatcaaga tgctttccag ttatacagat aatggaatag
3241 tggttgcaac tgctgaagac ttcatgcaaa actttaaaaa tcttgtgggc tatcacaatt
3301 caatcacaga agaaaacctt ccacagcttg gtgctaatga gaatcttgag tcgcagtcag
3361 atgctgtttt gacattaacc cctttggagc tgggagttgg gatttcccaa cattaaacgt
3421 gaacacattt cgcagaagct tttagcatcg gattatctgg acattcacat ctagtgtgag
3481 tgttgtgact aagtgaactt gtggcagaag accaagcttt aagggattgt ggacttgcag
3541 accctgacgc gttatattgt gtgagtagtg tataatttta aaacttaaac aaactgtgta
3601 tttcaataga ggaggacttt ttgtttttta aatgtagctc ttttagaaaa cgatgaaaag
3661 gatgaagagg atatgtctct ggattcaggg gatgaaatct cacatataga agtatgcagc
3721 aattttcatt cagaaatatg ggagaaagag accaaaggat cacgtggaac agatcaaaaa
3781 aagaatactc aaattgagtt gcaatcgtct cctgatgtgc aaaacagttt attagaagat
3841 aagacttacc ttgattctga agagagaact tctattgata tagtatgctc tgaaggagag
3901 aacagcaatt caacagaaca agattcatat agtaactttc aggtttatca tagtcaatta
3961 aatatgtccc atcagtttag tcattttaat gttctcactc atcagacatt tttggggaca
4021 ccatatgccc tttcatcaag tcagtctcaa gaaaatgaga attacttctt atctgcttat
4081 actgaaagct tggatagaga taaatctcca cctcccttaa gttgggggaa aagtgattct
4141 tccaggccat attcacaaga gaaataactg tagtaacttt ttttttaaga gattgttgtg
4201 gactttgttt attaacaatt tatatttcat tctctaaaca aaaggttctt gttctttctc
4261 aaatgttttt tcttttattt aaatcatgat ggcctgtaac agttgaagca tctaaaaatt
4321 gaaataaata tatattttta acatatattg tacttgaatt atctcatgtt ggcacttcta
4381 agttttactt tttgtatgtt acctgtactt aggcttcaaa ttgaagcctg ttttatgtgt
4441 aaaatcagat gcttgcagga ggacgg
//