LOCUS BC129933 4441 bp mRNA linear HUM 02-JAN-2007
DEFINITION Homo sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily
member 5), mRNA (cDNA clone MGC:156154 IMAGE:40082250), complete
cds.
ACCESSION BC129933
VERSION BC129933.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 6 Row: g Column: 2.
FEATURES Location/Qualifiers
source 1..4441
/db_xref="H-InvDB:HIT000390006"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:156154 IMAGE:40082250"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: NA"
gene 1..4441
/gene="MPP5"
/gene_synonym="PALS1"
/db_xref="GeneID:64398"
/db_xref="HGNC:HGNC:18669"
/db_xref="MIM:606958"
CDS 361..2388
/gene="MPP5"
/gene_synonym="PALS1"
/codon_start=1
/product="membrane protein, palmitoylated 5 (MAGUK p55
subfamily member 5)"
/protein_id="AAI29934.1"
/db_xref="GeneID:64398"
/db_xref="HGNC:HGNC:18669"
/db_xref="MIM:606958"
/translation="MTTSHMNGHVTEESDSEVKNVDLASPEEHQKHREMAVDCPGDLG
TRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNP
MFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQ
NAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALLNTPHIQ
ALLLAHDKVAEQEMQLEPITDERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMD
SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIP
SQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQA
YREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLY
NANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFA
SAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQV
INSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREI
IEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR"
BASE COUNT 1415 a 758 c 951 g 1317 t
ORIGIN
1 gaggtgggga gtcgggagtt tctggattct ttatccggaa tttcaagggc cgccggaggg
61 ctgtcgcttc tgcagtgcgt aggagcggcc ggggcgggag gctccgcgga gccgaggcgt
121 ggagaataag aaagccttga gttttgtgaa aaaccggaga agagaaacta aaaggacagt
181 agaaaaggct tttccagttt gcataatatt tccttcatgg atactttttc atagcattat
241 tatgtgatgt gagaagtttt tttttttgaa gtaacatgga ttttatacta cagaatcaag
301 agaattggct tataggaaaa attgatttat aaaaagtggt acaggttttc atagataacc
361 atgacaacat cccatatgaa tgggcatgtt acagaggaat cagacagcga agtaaaaaat
421 gttgatcttg catcaccaga ggaacatcag aagcaccgag agatggctgt tgactgccct
481 ggagatttgg gcaccaggat gatgccaata cgtcgaagtg cacagttgga gcgtattcgg
541 caacaacagg aggacatgag gcgtaggaga gaggaagaag ggaaaaagca agaacttgac
601 cttaattctt ccatgagact taagaaacta gcccaaattc ctccaaagac cggaatagat
661 aaccctatgt ttgatacaga ggaaggaatt gtcttagaaa gtcctcatta tgctgtgaaa
721 atattagaaa tagaagactt gttttcttca cttaaacata tccaacatac tttggtagat
781 tctcagagcc aggaggatat ttcactgctt ttacaacttg ttcaaaataa ggatttccag
841 aatgcattta agatacacaa tgccatcaca gtacacatga acaaggccag tcctccattt
901 cctcttatct ccaacgcaca agatcttgct caagaggtac aaactgtttt gaagccagtt
961 catcataagg aaggacaaga actaactgct ttgctgaata ctccacatat tcaggcactt
1021 ttactggccc acgataaggt tgctgagcag gaaatgcagc tagagcccat tacagatgag
1081 agagtttatg aaagtattgg ccagtatgga ggagaaactg taaaaatagt tcgtatagaa
1141 aaggctcgtg atattccgtt gggtgctaca gttcgtaatg aaatggactc tgtcatcatt
1201 agccggatag taaaaggggg tgctgcagag aaaagtggtc tgttgcatga aggagatgaa
1261 gttctagaga ttaatggcat tgaaattcgg gggaaagatg tcaatgaggt ttttgacttg
1321 ttgtctgata tgcatggtac tttgactttt gtcctgattc ccagtcaaca gatcaagccg
1381 cctcctgcca aggaaacagt aatccatgta aaagctcatt ttgactatga cccctcagat
1441 gacccttatg ttccatgtcg agagttaggt ctgtcttttc aaaaaggtga tatacttcat
1501 gtgatcagtc aagaagatcc aaactggtgg caggcctaca gggaagggga cgaagataat
1561 caacctctag ccgggcttgt tccagggaaa agctttcagc agcaaaggga agccatgaaa
1621 caaaccatag aagaagataa ggagccagaa aaatcaggaa aactgtggtg tgcaaagaag
1681 aataaaaaga agaggaaaaa ggttttatat aatgccaata aaaatgatga ttatgacaac
1741 gaggagatct taacctatga ggaaatgtca ctttatcatc agccagcaaa taggaagaga
1801 cctatcatct tgattggtcc acagaactgt ggccagaatg aattgcgtca gaggctcatg
1861 aacaaagaaa aggaccgctt tgcatctgca gttcctcata caacccggag taggcgagac
1921 caagaagtag ccggtagaga ttaccacttt gtttcgcggc aagcattcga ggcagacata
1981 gcagctggaa agttcattga gcatggtgaa tttgagaaga atttgtatgg aactagcata
2041 gattctgtac ggcaagtgat caactctggc aaaatatgtc ttttaagtct tcgtacacag
2101 tcattgaaga ctctccggaa ttcagatttg aaaccatata ttatcttcat tgcaccccct
2161 tcacaagaaa gacttcgggc attattggcc aaagaaggca agaatccaaa gcctgaagag
2221 ttgagagaaa tcattgagaa gacaagagag atggagcaga acaatggcca ctactttgat
2281 acggcaattg tgaattccga tcttgataaa gcctatcagg aattgcttag gttaattaac
2341 aaacttgata ctgaacctca gtgggtacca tccacttggc tgaggtgaaa gaaacatcca
2401 ttctgtggca tgttggactt gatctggcaa aaactgccaa taggaggact gcccgacact
2461 gcagcaagat tgaggataag atggaaggca gcagtataag ctgtagatct gttcttagat
2521 ctcttgaatt agtgagacga cagttccctt aggcagtttg tgcatggcat cctttattct
2581 ctatacatgg ctttagcggt tcttgcctca ttttgggatt ctaaatggaa gctttcaaca
2641 gagcattcca ttttgtcctg ttaaaacctt ttgttttcac ctaaaccctt tctgcttagt
2701 tgtatctctg tgaaaaactt gtatacacaa gcgtccatgt ctcacacaaa tattgatgtg
2761 attattctta agtgttaaat cattaacact taaatgactt cattgggaat attgagcaga
2821 gggactgtgc ttctatgcac tgggcaaggc agtatttgct taggaaacta atttagtcat
2881 cagagatact ttcctaaaaa ggaaaaataa aaaacaaaat ggtgccactt tgggttgaag
2941 ctactttgtt aggcttgaat tcatttatat gtcttttgat tcttaaaaaa acaaaaaaca
3001 ttccattaga agcaccagtt tttttgctca aactttgtgg atcagactct acactcaaca
3061 cactctaatc tacttaaagg tatacaaaat atgctgatct tttttaaatt atgatttcct
3121 gaattttttt cttaagtcgt ctcaactgat ttactcactt agcttccctt ccctcatcag
3181 catagtataa tagaatgtat gttacatttt tatgaatggc aggtgttcat tataatctgt
3241 attgacttaa aaagtttctt cctcatgatg ctaatagttt tttgtataca tgggaggata
3301 gcacatttga cagtttttgc atttttatgt atgagcacag tatcctatga ctgtgctacg
3361 tatatatagg taataaactg gaattctgtt gatgaatata gctgctgtac tgtatattaa
3421 tatttaatag atcaacaaat ggtcattgaa aacacttgtt tagcattaga ataaaattat
3481 atatgtcctt gggaaatatt atgacagttg actttaagat caaaaggaag ggaagacctg
3541 aaagtcattt gaacatttta ggaaaagaat attggagaga aaaaggtatt aaatatatag
3601 aaataggttt ttaacctaac aaggtctgcc tcttatgacg agaatgcaac agcttggtaa
3661 atcataaaag aaacatttaa gctaatagga ttttcgtact gtctctatag ctgtagcttt
3721 aaaattcaac gtatataatt ggcatggaaa cttaatttgc agtcttttca agcctttagg
3781 atagtgtgat gtgtaacaaa caacctcaaa tgtgaatgcc ttgattttat ttttatggtg
3841 actttagcta cagcatttcc tatacccaga gctaaacact ggaataatac tgacatcatt
3901 taatttaaca taagcaatta tgtttaagga gtaatttgtg tcatgtacat atttgattga
3961 ttttttttct tctacataat tttatttgaa caaatgtaga cagtttatat gtcgcctttt
4021 tctgttcaaa tttgcatggc ctattaagtt ggctggagag tgttttatgt ggaaatattt
4081 tcaagataat gttccttagg aagaaaataa cattcttggg ttgagggaag gaatgccata
4141 cactactgtc tcttcagatc tgaaatactc cagtttagag ccaggaaatt tcacaggtca
4201 caccgatttt tagcattaaa aactaaggaa tatacttagc acttacttaa tcttttcagt
4261 tttccagttt acgtctcagg aatgaagtgt agtctatggt tgacaatgga gttttgtgat
4321 cctgcttatt gtaactgaca actgttttca actccaagag ctaaactatt ggcagttcat
4381 gttaagttag agtgagggtg taggtagtgt cagtgagtgg ctcttgtgcc tgcatagttc
4441 c
//