LOCUS BC129931 4299 bp mRNA linear HUM 02-JAN-2007
DEFINITION Homo sapiens stereocilin, mRNA (cDNA clone MGC:156147
IMAGE:40070194), complete cds.
ACCESSION BC129931
VERSION BC129931.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4299)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4299)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 5 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..4299
/db_xref="H-InvDB:HIT000390004"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:156147 IMAGE:40070194"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: NA"
gene 1..4299
/gene="STRC"
/db_xref="GeneID:161497"
/db_xref="HGNC:HGNC:16035"
/db_xref="MIM:606440"
CDS 1244..4252
/gene="STRC"
/codon_start=1
/product="STRC protein"
/protein_id="AAI29932.1"
/db_xref="GeneID:161497"
/db_xref="HGNC:HGNC:16035"
/db_xref="MIM:606440"
/translation="MELLACFSPVLWDLLQREKSVWALQILVQAYLHMPPENLQQLVL
SAEREAAQGFLTLMLQGKLQGKLQVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPL
IPFLAVSDLMRFPPSLLANDSVQQGYRGSEENSLEEDKGLRPMTPRSLAAIRDYSPGM
RPEQKEALAKRLLAPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALEDS
WPAAGLGPGHARHVLRSLVNQSVQDGEEQVRRLGPLACFLSPEELQSLVPLSDPTGPV
ERGLLECAANGTLSPEGRVAYELLGVLRSSGGAVLSPRELRVWAPLFSQLGLRFLQEL
SEPQLRAMLPVLQGTSVTPAQAVLLLGRLLPRHDLLQLDSLALLANRRRYWELPWSEQ
QAQFLWKKMQVPTNLTLRNLQALGTLAGGMSCEFLQQINSMVDFLEVVHMIYQLPTRV
RGSLRACIWAELQRRMAMPEPEWTTVGPELNGLDSKLLLDLPIQLMDRLSNESIMLVV
ELVQRAPEQLLALTPLHQAALAERALQNLAPKETPVSGEVLETLGPLVGFLGTESTRQ
IPLQILLSHLSQLQGFCLGETFATELGWLLLQESVLGKPELWSQDEVEQAGRLVFTLS
TEAISLIPREALGPETLERLLEKQQSWEQSRVGQLCREPQLAAKKAALVAGVVRPAAE
DLPEPVPNCADVRGTFPAAWSATQIAEMELSDFEDCLTLFAGDPGLGPEELRAAMGKA
KQLWGPPQGFRPEQILQLGRLLIGLGDRELQELILVDWGVLSTLGQIDGWSTTQLRIV
VSSFLRQSGRHVSHLDFVHLTALGYTLCGLRPEELQHISSWEFSQAALFLGTLHLQCS
EEQLEVLAHLLVLPGGFGPISNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGVTPLA
ISVIPPPKFAVVFSPIQLSSLTSAQAVAVTPEQMAFLSPEQRRAVAWAQHEGKESPEQ
QGRSTAWGLQDWSRPSWSLVLTISFLGHLL"
BASE COUNT 856 a 1253 c 1262 g 928 t
ORIGIN
1 cctgccctca cctggctatc ccacacaggt gagaataacc agaactcacc tccggtacca
61 gtgttcactt ggaaacatgg ctctcagcct ctggcccctg ctgctgctgc tgctgctgct
121 gctgctgctg tcctttgcag tgactctggc ccctactggg cctcattccc tggaccctgg
181 tctctccttc ctgaagtcat tgctctccac tctggaccag gctccccagg gctccctgag
241 ccgctcacgg ttctttacat tcctggccaa catttcttct tcctttgagc ctgggagaat
301 gggggaagga ccagtaggag agcccccacc tctccagccg cctgctctgc ggctccatga
361 ttttctagtg acactgagag gtagccccga ctgggagcca atgctagggc tgctagggga
421 tatgctggca ctgctgggac aggagcagac tccccgagat ttcctggtgc accaggcagg
481 ggtgctgggt ggacttgtgg aggtgctgct gggagcctta gttcctgggg gcccccctac
541 cccaactcgg cccccatgca cccgtgatgg gccgtctgac tgtgtcctgg ctgctgactg
601 gttgccttct ctgctgctgt tgttagaggg cacacgctgg caagctctgg tgcaggtgca
661 gcccagtgtg gaccccacca atgccacagg cctcgatggg agggaggcag ctcctcactt
721 tttgcagggt ctgttgggtt tgcttacccc aacaggggag ctaggctcca aggaggctct
781 ttggggcggt ctgctacgca cagtgggggc ccccctctat gctgcctttc aggaggggct
841 gctccgtgtc actcactccc tgcaggatga ggtcttctcc attttggggc agccagagcc
901 tgataccaat gggcagtgcc agggaggtaa ccttcaacag ctgctcttat ggggcgtccg
961 gcacaacctt tcctgggatg tccaggcgct gggctttctg tctggatcac cacccccacc
1021 ccctgccctc cttcactgcc tgagcacggg cgtgcctctg cccagagctt ctcagccgtc
1081 agcccacatc agcccacgcc aacggcgagc catcactgtg gaggccctct agggccggcg
1141 cagtgtgcta cggacgattg gggaatacct ggaacaagat gaggagcagc caaccccatc
1201 aggctttgaa cccactgtca accccagctc tggtataagc aagatggagc tgctggcctg
1261 ctttagtcct gtgctgtggg atctgctcca gagggaaaag agtgtttggg ccctgcagat
1321 tctagtgcag gcgtacctgc atatgccccc agaaaacctc cagcagctgg tgctttcagc
1381 agagagggag gctgcacagg gcttcctgac actcatgctg caggggaagc tgcaggggaa
1441 gctgcaggta ccaccatccg aggagcaggc cctgggtcgc ctgacagccc tgctgctcca
1501 gcggtaccca cgcctcacct cccagctctt cattgacctg tcaccactca tccctttctt
1561 ggctgtctct gacctgatgc gcttcccacc atccctgtta gccaacgaca gtgtacagca
1621 gggctacaga gggtcagagg aaaacagttt ggaggaagac aaagggttaa gacccatgac
1681 tcctcgcagc ctggctgcca tccgggatta cagcccagga atgaggcctg aacagaagga
1741 ggctctggca aagcgactgc tggcccctga actgtttggg gaagtgcctg cctggcccca
1801 ggagctgctg tgggcagtgc tgcccctgct cccccacctc cctctggaga actttttgca
1861 gctcagccct caccagatcc aggccctgga ggatagctgg ccagcagcag gtctggggcc
1921 agggcatgcc cgccatgtgc tgcgcagcct ggtaaaccag agtgtccagg atggtgagga
1981 gcaggtacgc aggcttgggc ccctcgcctg tttcctgagc cctgaggagc tgcagagcct
2041 agtgcccctg agtgatccaa cggggccagt agaacggggg ctgctggaat gtgcagccaa
2101 tgggaccctc agcccagaag gacgggtggc atatgaactt ctgggtgtgt tgcgctcatc
2161 tggaggagcg gtgctgagcc cccgggagct gcgggtctgg gcccctctct tctctcagct
2221 gggcctccgc ttccttcagg agctgtcaga gccccagctt agagccatgc ttcctgtcct
2281 gcagggaact agtgttacac ctgctcaggc tgtcctgctg cttggacggc tccttcctag
2341 gcacgatctg ctacaactgg attccttggc tcttctggca aatcgaagac gctactggga
2401 gctgccctgg tctgagcagc aggcacagtt tctctggaag aagatgcaag tacccaccaa
2461 ccttaccctc aggaatctgc aggctctggg caccctggca ggaggcatgt cctgtgagtt
2521 tctgcagcag atcaactcca tggtagactt ccttgaagtg gtgcacatga tctatcagct
2581 gcccactaga gttcgaggga gcctgagggc ctgtatctgg gcagagctac agcggaggat
2641 ggcaatgcca gaaccagaat ggacaactgt agggccagaa ctgaacgggc tggatagcaa
2701 gctactcctg gacttaccga tccagttgat ggacagacta tccaatgaat ccattatgtt
2761 ggtggtggag ctggtgcaaa gagctccaga gcagctgctg gcactgaccc ccctccacca
2821 ggcagccctg gcagagaggg cactacaaaa cctggctcca aaggagactc cagtctcagg
2881 ggaagtgctg gagaccttag gccctttggt tggattcctg gggacagaga gcacacgaca
2941 gatcccccta cagatcctgc tgtcccatct cagtcagctg caaggcttct gcctaggaga
3001 gacatttgcc acagagctgg gatggctgct attgcaggag tctgttcttg ggaaaccaga
3061 gttgtggagc caggatgaag tagagcaagc tggacgccta gtattcactc tgtctactga
3121 ggcaatttcc ttgatcccca gggaggcctt gggtccagag accctggagc ggcttctaga
3181 aaagcagcag agctgggagc agagcagagt tggacagctg tgtagggagc cacagcttgc
3241 tgccaagaaa gcagccctgg tagcaggggt ggtgcgacca gctgctgagg atcttccaga
3301 acctgtgcca aattgtgcag atgtacgagg gacattccca gcagcctggt ctgcaaccca
3361 gattgcagag atggagctct cagactttga ggactgcctg acattatttg caggagaccc
3421 aggacttggg cctgaggaac tgcgggcagc catgggcaaa gcaaaacagt tgtggggtcc
3481 cccccaggga tttcgtcctg agcagatcct gcagcttggt aggctcttaa taggtctagg
3541 agatcgggaa ctacaggagc tgatcctagt ggactgggga gtgctgagca ccctggggca
3601 gatagatggc tggagcacca ctcagctccg cattgtggtc tccagtttcc tacggcagag
3661 tggtcggcat gtgagccacc tggacttcgt tcatctgaca gcgctgggtt atactctctg
3721 tggactgcgg ccagaggagc tccagcacat cagcagttgg gagttcagcc aagcagctct
3781 cttcctcggc accctgcatc tccagtgctc tgaggaacaa ctggaggttc tggcccacct
3841 acttgtactg cctggtgggt ttggcccaat cagtaactgg gggcctgaga tcttcactga
3901 aattggcacc atagcagctg ggatcccaga cctggctctt tcagcactgc tgcggggaca
3961 gatccagggc gttactcctc ttgccatttc tgtcatccct cctcctaaat ttgctgtggt
4021 gtttagtccc atccaactat ctagtctcac cagtgctcag gctgtggctg tcactcctga
4081 gcaaatggcc tttctgagtc ctgagcagcg acgagcagtt gcatgggccc aacatgaggg
4141 aaaggagagc ccagaacagc aaggtcgaag tacagcctgg ggcctccagg actggtcacg
4201 accttcctgg tccctggtat tgactatcag cttccttggc cacctgctat gagcctgtct
4261 ctacagtaga aggagattgt ggggagagaa aatagttat
//