LOCUS BC129830 4173 bp mRNA linear HUM 02-JAN-2007
DEFINITION Homo sapiens tenascin R (restrictin, janusin), mRNA (cDNA clone
MGC:149328 IMAGE:40114168), complete cds.
ACCESSION BC129830
VERSION BC129830.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4173)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4173)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: f Column: 23.
FEATURES Location/Qualifiers
source 1..4173
/db_xref="H-InvDB:HIT000389992"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149328 IMAGE:40114168"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GAACCAAA sequenced from the reverse primer"
gene 1..4173
/gene="TNR"
/db_xref="GeneID:7143"
/db_xref="HGNC:HGNC:11953"
/db_xref="MIM:601995"
CDS 182..3955
/gene="TNR"
/codon_start=1
/product="TNR protein"
/protein_id="AAI29831.1"
/db_xref="GeneID:7143"
/db_xref="HGNC:HGNC:11953"
/db_xref="MIM:601995"
/translation="MGQTSDHESQVTFTHRINFPKKACPCASSAQVLQELLSRIEMLE
REVSVLRDQCNANCCQESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPY
CPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDC
RELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCVCEEGYQ
GPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVPGDW
SGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQW
EPFSFSFDGWEISFIPKNNEGGVIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARS
PPTSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFR
LQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNLRVGSRTATS
LDLEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPRGIGPTTRATLTDLVPGTEYGVGIS
AVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSG
IASEVTVPKDRTSYTLTDLEPGAEYIISVTAERGRQQSLESTVDAFTGFRPISHLHFS
HVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEYI
VNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYR
PTQVGRLDSSVVPNTVTEFTITRLNPATEYEISLNSVRGREESERICTLVHTAMDNPV
DLIATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGVSEEFRLVDLLPST
HYTATMYATNGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVL
TYKSTDGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDTTWSSITSTAFTTGGRV
FPHPQDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTD
FFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVE
DSRNLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHR
TNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLMAGRKRQSLQF"
BASE COUNT 985 a 1157 c 1161 g 870 t
ORIGIN
1 cgatctatgg cctgggtagg agggaggcat tgccaactac aacacatcca gcaaagagca
61 gcctgtggtc ttcaaccacg tgtacaacat taacgtgccc ttggacaacc tctgctcctc
121 agggctagag gcctctgctg agcaggaggt gagtgcagaa gacgagactc tggcagagta
181 catgggccag acctcagacc acgagagcca ggtcaccttt acacacagga tcaacttccc
241 caaaaaggcc tgtccatgtg ccagttcagc ccaggtgctg caggagctgc tgagccggat
301 cgagatgctg gagagggagg tgtcggtgct gcgagaccag tgcaacgcca actgctgcca
361 agaaagtgct gccacaggac aactggacta tatccctcac tgcagtggcc acggcaactt
421 tagctttgag tcctgtggct gcatctgcaa cgaaggctgg tttggcaaga attgctcgga
481 gccctactgc ccgctgggtt gctccagccg gggggtgtgt gtggatggcc agtgcatctg
541 tgacagcgag tacagcgggg atgactgttc cgaactccgg tgcccaacag actgcagctc
601 ccgggggctc tgcgtggacg gggagtgtgt ctgtgaagag ccctacactg gcgaggactg
661 cagggaactg aggtgccctg gggactgttc ggggaagggg agatgtgcca acggtacctg
721 tttatgcgag gagggctacg ttggtgagga ctgcggccag cggcagtgtc tgaatgcctg
781 cagtgggcga ggacaatgtg aggaggggct ctgcgtctgt gaagagggct accagggccc
841 tgactgctca gcagttgccc ctccagagga cttgcgagtg gctggtatca gcgacaggtc
901 cattgagctg gaatgggacg ggccgatggc agtgacggaa tatgtgatct cttaccagcc
961 gacggccctg gggggcctcc agctccagca gcgggtgcct ggagattgga gtggtgtcac
1021 catcacggag ctggagccag gtctcaccta caacatcagc gtctacgctg tcattagcaa
1081 catcctcagc cttcccatca ctgccaaggt ggccacccat ctctccactc ctcaagggct
1141 acaatttaag acgatcacag agaccaccgt ggaggtgcag tgggagccct tctcattttc
1201 cttcgatggg tgggaaatca gcttcattcc aaagaacaat gaagggggag tgattgctca
1261 ggtccccagc gatgttacgt cctttaacca gacaggacta aagcctgggg aggaatacat
1321 tgtcaatgtg gtggctctga aagaacaggc ccgcagcccc cctacctcgg ccagcgtctc
1381 cacagtcatt gacggcccca cgcagatcct ggttcgcgat gtctcggaca ctgtggcttt
1441 tgtggagtgg attccccctc gagccaaagt cgatttcatt cttttgaaat atggcctggt
1501 gggcggggaa ggtgggagga ccaccttccg gctgcagcct cccctgagcc aatactcagt
1561 gcaggccctg cggcctggct cccgatacga ggtgtcagtc agtgccgtcc gagggaccaa
1621 cgagagcgat tctgccacca ctcagttcac aacagagatc gatgccccca agaacttgcg
1681 agttggttct cgcacagcaa ccagccttga cctcgagtgg gataacagtg aagccgaagt
1741 tcaggagtac aaggttgtgt acagcaccct ggcgggtgag caatatcatg aggtactggt
1801 ccccaggggc attggtccaa ccaccagggc caccctgaca gatctggtac ctggcactga
1861 gtatggagtt ggaatatctg ccgtcatgaa ctcacagcaa agcgtgccag ccaccatgaa
1921 tgccaggact gaacttgaca gtccccgaga cctcatggtg acagcctcct cagagacctc
1981 catctccctc atctggacca aggccagtgg ccccattgac cactaccgaa ttacctttac
2041 cccatcctct gggattgcct cagaagtcac cgtacccaag gacaggacct catacacact
2101 aacagatcta gagcctgggg cagagtacat catttccgtc actgctgaga ggggtcggca
2161 gcagagcttg gagtccactg tggatgcttt cacaggcttc cgtcccatct ctcatctgca
2221 cttttctcat gtgacctcct ccagtgtgaa catcacttgg agtgatccat ctcccccagc
2281 agacagactc attcttaact acagccccag ggatgaggag gaagagatga tggaggtctc
2341 cctggatgcc accaagaggc atgctgtcct gatgggcctg caaccagcca cagagtatat
2401 tgtgaacctt gtggctgtcc atggcacagt gacctctgag cccattgtgg gctccatcac
2461 cacaggaatt gatcccccaa aagacatcac aattagcaat gtgaccaagg actcagtgat
2521 ggtctcctgg agccctcctg ttgcatcttt cgattactac cgagtatcat atcgacccac
2581 ccaagtggga cgactagaca gctcagtggt gcccaacact gtgacagaat tcaccatcac
2641 cagactgaac ccagctaccg aatacgaaat cagcctcaac agcgtgcggg gcagggagga
2701 aagcgagcgc atctgtactc ttgtgcacac agccatggac aaccctgtgg atctgattgc
2761 taccaatatc actccaacag aagccctgct gcagtggaag gcaccagtgg gtgaggtgga
2821 gaactacgtc attgttctta cacactttgc agtcgctgga gagaccatcc ttgttgacgg
2881 agtcagtgag gaatttcggc ttgttgacct gcttcctagc acccactata ctgccaccat
2941 gtatgccacc aatggacctc tcaccagtgg caccatcagc accaactttt ctactctcct
3001 ggaccctccg gcaaacctga cagccagtga agtcaccaga caaagtgccc tgatctcctg
3061 gcagcctccc agggcagaga ttgaaaatta tgtcttgacc tacaaatcca ccgacggaag
3121 ccgcaaggag ctgattgtgg atgcagaaga cacctggatt cgactggagg gcctgttgga
3181 gaacacagac tacacggtgc tcctgcaggc agcacaggac accacgtgga gcagcatcac
3241 ctccaccgct ttcaccacag gaggccgggt gttccctcat ccccaagact gtgcccagca
3301 tttgatgaat ggagacactt tgagtggggt ttaccccatc ttcctcaatg gggagctgag
3361 ccagaaatta caagtgtact gtgatatgac caccgacggg ggcggctgga ttgtattcca
3421 gaggcggcag aatggccaaa ctgatttttt ccggaaatgg gctgattacc gtgttggctt
3481 cgggaacgtg gaggatgagt tctggctggg gctggacaat atacacagga tcacatccca
3541 gggccgctat gagctgcgcg tggacatgcg ggatggccag gaggccgcct tcgcctccta
3601 cgacaggttc tctgtcgagg acagcagaaa cctgtacaaa ctccgcatag gaagctacaa
3661 cggcactgcg ggggactccc tcagctatca tcaaggacgc cctttctcca cagaggatag
3721 agacaatgat gttgcagtga ctaactgtgc catgtcgtac aagggagcat ggtggtataa
3781 gaactgccac cggaccaacc tcaatgggaa gtacggggag tccaggcaca gtcagggcat
3841 caactggtac cattggaaag gccatgagtt ctccatcccc tttgtggaaa tgaagatgcg
3901 cccctacaac caccgtctca tggcagggag aaaacggcag tccttacagt tctgagcagt
3961 gggcggctgc aagccaacca atattttctg tcatttgttt gtattttata atatgaaaca
4021 aggggggagg gtaatagcaa tgtgttttgc aacatattaa gagtatgtga aggaagcagg
4081 gatgtcgcag gaatccgctg gctaacatct gctcttggtt tctgctgccc tggagcctga
4141 ccctcagtct ccattctccc tcctacccag gcc
//