LOCUS BC128576 2723 bp mRNA linear HUM 06-FEB-2007
DEFINITION Homo sapiens potassium voltage-gated channel, KQT-like subfamily,
member 3, mRNA (cDNA clone IMAGE:40128535), partial cds.
ACCESSION BC128576
VERSION BC128576.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2723)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 9 Row: d Column: 5.
FEATURES Location/Qualifiers
source 1..2723
/db_xref="H-InvDB:HIT000389930"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40128535"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGTCCATA sequenced from
the forward primer"
gene <1..2723
/gene="KCNQ3"
/gene_synonym="BFNC2"
/gene_synonym="KV7.3"
/db_xref="GeneID:3786"
/db_xref="HGNC:HGNC:6297"
/db_xref="MIM:602232"
CDS <1..2551
/gene="KCNQ3"
/gene_synonym="BFNC2"
/gene_synonym="KV7.3"
/codon_start=2
/product="KCNQ3 protein"
/protein_id="AAI28577.1"
/db_xref="GeneID:3786"
/db_xref="HGNC:HGNC:6297"
/db_xref="MIM:602232"
/translation="RAAAEKAKRPAGARQMGLKARRAAAGDEERKVGLAPGDVEQVTL
ALGAGANKDGTLLLEGGGRDEGQRRTPQGIGLLAKTPLSRPVKRNNAKYRRIQTLIYD
ALERPRGWALLYHALVFLIVLGCLILAVLTTFKEYETVSGDWLLLLETFAIFIFGAEF
ALRIWAAGCCCRYKGWRGRLKFARKPLCMLDIFVLIASVPVVAVGNQGNVLATSLRSL
RFLQILRMLRMDRRGGTWKLLGSAICAHSKELITAWYIGFLTLILSSFLVYLVEKDVP
EVDAQGEEMKEEFETYADALWWGLITLATIGYGDKTPKTWEGRLIAATFSLIGVSFFA
LPAGILGSGLALKVQEQHRQKHFEKRRKPAAELIQAAWRYYATNPNRIDLVATWRFYE
SVVSFPFFRKEQLEAASSQKLGLLDRVRLSNPRGSNTKGKLFTPLNVDAIEESPSKEP
KPVGLNNKERFRTAFRMKAYAFWQSSEDAGTGDPMAEDRGYGNDFPIEDMIPTLKAAI
RAVRILQFRLYKKKFKETLRPYDVKDVIEQYSAGHLDMLSRIKYLQTRIDMIFTPGPP
STPKHKKSQKGNEPYVARPSTSEIEDQSMMGKFVKVERQVQDMGKKLDFLVDMHMQHM
ERLQVQVTEYYPTKGTSSPAEAEKKEDNRYSDLKTIICNYSETGPPEPPYSFHQVTID
KVSPYGFFAHDPVNLPRGGPSSGKVQATPPSSATTYVERPTVLPILTLLDSRVSCHSQ
ADLQGPYSDRISPRQRRSITRDSDTPLSLMSVNHEELERSPSGFSISQDRDDYVFGPN
GGSSWMREKRYLAEGETDTDTDPFTPSGSMPLSSTGDGISDSVWTPSNKPI"
BASE COUNT 641 a 746 c 768 g 568 t
ORIGIN
1 cagagcagca gcggagaagg cgaagcggcc ggcgggggcg aggcagatgg ggctcaaggc
61 gcgcagggcg gcggccggcg acgaggagcg gaaagtgggg ctggcgcccg gcgacgtgga
121 gcaagtcacc ttggcgctcg gggccggagc caacaaagac gggaccctgc tgctggaggg
181 cggcggccgc gacgaggggc agcggaggac cccgcagggc atcgggctcc tggccaagac
241 cccgctgagc cgcccagtca agagaaacaa cgccaagtac cggcgcatcc aaactttgat
301 ctacgacgcc ctggagagac cgcggggctg ggcgctgctt taccacgcgt tggtgttcct
361 gattgtcctg gggtgcttga ttctggctgt cctgaccaca ttcaaggagt atgagactgt
421 ctcgggagac tggcttctgt tactggagac atttgctatt ttcatctttg gagccgagtt
481 tgctttgagg atctgggctg ctggatgttg ctgccgatac aaaggctggc ggggccgact
541 gaagtttgcc aggaagcccc tgtgcatgtt ggacatcttt gtgctgattg cctctgtgcc
601 agtggttgct gtgggaaacc aaggcaatgt tctggccacc tccctgcgaa gcctgcgctt
661 cctgcagatc ctgcgcatgc tgcggatgga ccggagaggt ggcacctgga agcttctggg
721 ctcagccatc tgtgcccaca gcaaagaact catcacggcc tggtacatcg gtttcctgac
781 actcatcctt tcttcatttc ttgtctacct ggttgagaaa gacgtcccag aggtggatgc
841 acaaggagag gagatgaaag aggagtttga gacctatgca gatgccctgt ggtggggcct
901 gatcacactg gccaccattg gctatggaga caagacaccc aaaacgtggg aaggccgtct
961 gattgccgcc accttttcct taattggcgt ctcctttttt gcccttccag cgggcatcct
1021 ggggtccggg ctggccctca aggtgcagga gcaacaccgt cagaagcact ttgagaaaag
1081 gaggaagcca gctgctgagc tcattcaggc tgcctggagg tattatgcta ccaaccccaa
1141 caggattgac ctggtggcga catggagatt ttatgaatca gtcgtctctt ttcctttctt
1201 caggaaagaa cagctggagg cagcatccag ccaaaagctg ggtctcttgg atcgggttcg
1261 cctttctaat cctcgtggta gcaatactaa aggaaagcta tttacccctc tgaatgtaga
1321 tgccatagaa gaaagtcctt ctaaagaacc aaagcctgtt ggcttaaaca ataaagagcg
1381 tttccgcacg gccttccgca tgaaagccta cgctttctgg cagagttctg aagatgccgg
1441 gacaggtgac cccatggcgg aagacagggg ctatgggaat gacttcccca tcgaagacat
1501 gatccccacc ctgaaggccg ccatccgagc cgtcagaatt ctacaattcc gtctctataa
1561 aaaaaaattc aaggagactt tgaggcctta cgatgtgaag gatgtgattg agcagtattc
1621 tgccgggcat ctcgacatgc tttccaggat aaagtacctt cagacgagaa tagatatgat
1681 tttcacccct ggacctccct ccacgccaaa acacaagaag tctcagaaag ggaatgaacc
1741 atatgtagcc agaccatcca catcagaaat cgaagaccaa agcatgatgg ggaagtttgt
1801 aaaagttgaa agacaggttc aggacatggg gaagaagctg gacttcctcg tggatatgca
1861 catgcaacac atggaacggt tgcaggtgca ggtcacggag tattacccaa ccaagggcac
1921 ctcctcgcca gctgaagcag agaagaagga ggacaacagg tattccgatt tgaaaaccat
1981 catctgcaac tattctgaga caggcccccc ggaaccaccc tacagcttcc accaggtgac
2041 cattgacaaa gtcagcccct atgggttttt tgcacatgac cctgtgaacc tgccccgagg
2101 gggacccagt tctggaaagg ttcaggcaac tcctccttcc tcagcaacaa cgtatgtgga
2161 gaggcccacg gtcctgccta tcttgactct tctcgactcc cgagtgagct gccactccca
2221 ggctgacctg cagggcccct actcggaccg aatctccccc cggcagagac gtagcatcac
2281 gcgagacagt gacacacctc tgtccctgat gtcggtcaac cacgaggagc tggagaggtc
2341 tccaagtggc ttcagcatct cccaggacag agatgattat gtgttcggcc ccaatggggg
2401 gtcgagctgg atgagggaga agcggtacct cgccgagggt gagacggaca cagacacgga
2461 ccccttcacg cccagcggct ccatgcctct gtcgtccaca ggggatggga tttctgattc
2521 agtatggacc ccttccaata agcccattta aaagaggtca ctggctgacc cttccttgta
2581 atgtagacag actttgtata gttcacttac tcttacaccc gacgcttacc agcggggaca
2641 ccaatggctg catcaaatgc atgcgtgtgc gtggtggccc cacccaggca ggggcttccc
2701 acagcctctt cctccccatg tca
//