LOCUS BC128421 2532 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens dynein, axonemal, heavy chain 9, mRNA (cDNA clone
IMAGE:40118426), complete cds.
ACCESSION BC128421
VERSION BC128421.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2532)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2532)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: j Column: 20
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2532
/db_xref="H-InvDB:HIT000389832"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40118426"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TCTTTATC sequenced from the reverse primer"
gene 1..2532
/gene="DNAH9"
/gene_synonym="Dnahc9"
/gene_synonym="DNEL1"
/gene_synonym="DYH9"
/gene_synonym="HL-20"
/gene_synonym="HL20"
/db_xref="GeneID:1770"
/db_xref="HGNC:HGNC:2953"
/db_xref="MIM:603330"
CDS 70..2466
/gene="DNAH9"
/gene_synonym="Dnahc9"
/gene_synonym="DNEL1"
/gene_synonym="DYH9"
/gene_synonym="HL-20"
/gene_synonym="HL20"
/codon_start=1
/product="DNAH9 protein"
/protein_id="AAI28422.1"
/db_xref="GeneID:1770"
/db_xref="HGNC:HGNC:2953"
/db_xref="MIM:603330"
/translation="MNDLSKIHPMYQFSLKAFSIVFQKAVERAAPDESLRERVANLID
SITFSVYQYTIRGLFECDKLTYLAQLTFQILLMNREVNAVELDFLLRSPVQTGTASPV
EFLSHQAWGAVKVLSSMEEFSNLDRDIEGSAKSWKKFVESECPEKEKLPQEWKNKTAL
QRLCMLRAMRPDRMTYALRDFVEEKLGSKYVVGRALDFATSFEESGPATPMFFILSPG
VDPLKDVESQGRKLGYTFNNQNFHNVSLGQGQEVVAEAALDLAAKKGHWVILQNIHLV
AKWLSTLEKKLEEHSENSHPEFRVFMSAEPAPSPEGHIIPQGILENSIKITNEPPTGM
HANLHKALDNFTQDTLEMCSRETEFKSILFALCYFHAVVAERRKFGPQGWNRSYPFNT
GDLTISVNVLYNFLEANAKVPYDDLRYLFGEIMYGGHITDDWDRRLCRTYLGEFIRPE
MLEGELSLAPGFPLPGNMDYNGYHQYIDAELPPESPYLYGLHPNAEIGFLTQTSEKLF
RTVLELQPRDSQARDGAGATREEKVKALLEEILERVTDEFNIPELMAKVEERTPYIVV
AFQECGRMNILTREIQRSLRELELGLKGELTMTSHMENLQNALYFDMVPESWARRAYP
STAGLAAWFPDLLNRIKELEAWTGDFTMPSTVWLTGFFNPQSFLTAIMQSTARKNEWP
LDQMALQCDMTKKNREEFRSPPREGAYIHGLFMEGACWDTQAGIITEAKLKDLTPPMP
VMFIKAIPADKQDCRSVYSCPVYKTSQRGPTYVWTFNLKTKENPSKWVLAGVALLLQI
"
BASE COUNT 647 a 674 c 678 g 533 t
ORIGIN
1 gtgaaaatca acgaggcccg agagcactac cggccagcag ctgccagggc ctcactgctc
61 tacttcatca tgaacgacct cagcaagatc catccaatgt accagttttc tctcaaggcc
121 ttcagtatcg tcttccagaa ggctgtggag agggctgctc ctgacgaaag cctcagggag
181 cgggtggcca acctaataga cagcataacc ttctctgtgt accagtacac catccgcggg
241 ctctttgagt gtgataagct gacctacctt gcccagctca cctttcagat tctcctcatg
301 aaccgagaag tcaatgcagt ggagttggat ttcctgcttc gatctccagt gcagacgggc
361 accgccagcc ccgtggagtt cctctcccat caggcgtggg gagctgtcaa ggtactttca
421 tcaatggaag aattctctaa tctggatcgg gacatagagg gatctgctaa gagctggaaa
481 aagtttgtgg agtccgaatg tcctgagaaa gagaagctcc cacaggagtg gaagaacaag
541 acagccctgc agcgcctctg catgctgaga gccatgcggc ccgaccggat gacctatgct
601 ttgcgagatt ttgttgaaga gaagttagga agcaaatacg tggtgggaag agccctagat
661 tttgcaacct catttgaaga atcgggacca gccactccta tgtttttcat cctgtctcca
721 ggggtggacc cactgaagga tgtagaaagt caaggaagaa aacttggata caccttcaac
781 aatcagaact ttcacaacgt gtctttgggg caaggacagg aagtggtggc tgaggctgcg
841 ctggacctcg ctgccaagaa aggtcactgg gttattttgc agaacattca cctggtggcc
901 aagtggctca gcaccctgga gaagaagctg gaggagcaca gtgagaacag ccacccagag
961 ttcagggtct tcatgagtgc agagccagca ccctcccctg agggccacat catcccccag
1021 ggcatcctgg agaactccat taagatcacc aatgagcccc ccacgggcat gcatgccaac
1081 ctgcacaagg ccctggacaa cttcactcag gacactctgg agatgtgttc tcgggagacg
1141 gagtttaaga gcatcctctt tgctctttgt tacttccatg cggtggtggc agaaagacga
1201 aaatttgggc cccagggatg gaatcgctca taccccttta acactggaga cctcactatc
1261 tctgtgaatg tcctctacaa cttcctggag gccaacgcaa aggtccccta tgatgatttg
1321 cgctacctgt ttggagagat catgtatgga ggccatatca cagatgactg ggacagaaga
1381 ctctgcagaa cctacctggg ggaattcatt cgaccagaaa tgttagaagg agaactgtct
1441 ttggccccag ggttcccact cccaggcaac atggactaca atggttatca tcagtacatc
1501 gatgctgagc tgcccccaga atccccctac ctctatggcc tccacccgaa cgcagagatt
1561 ggcttcctga cccaaacctc agaaaagctc ttccgcactg tgctggagct gcagcctcgg
1621 gacagccagg ccagagacgg agcgggcgcc acaagagaag aaaaggtcaa ggcacttctg
1681 gaagaaatat tggagcgggt gacagacgag tttaacatcc cagaactgat ggccaaagtg
1741 gaggagcgca ccccttacat tgtagttgcc ttccaggagt gtggccggat gaatatcctc
1801 accagagaga ttcagcgctc actgagggag ctggagctcg gcttaaaggg ggagctgact
1861 atgaccagcc acatggagaa cttacagaat gccctgtact tcgatatggt gccagagtcc
1921 tgggctagac gagcctaccc ttccacagca ggcctggcag cctggtttcc agacctcctc
1981 aacagaatca aggagctaga ggcttggacg ggtgacttta caatgccctc cactgtgtgg
2041 ctgacaggct tcttcaaccc ccagtcgttc ctgactgcca tcatgcagtc cacggctcgc
2101 aagaatgagt ggccactgga ccagatggcc ctgcaatgtg acatgacgaa gaagaacaga
2161 gaagagttta ggagtcctcc tcgggaaggg gcctacatcc atggcctctt catggaaggt
2221 gcctgctggg acacacaggc tgggatcatt acagaggcaa agctgaagga tctgacaccc
2281 cctatgcctg tgatgttcat caaggccatt cctgcagata agcaggactg ccgcagtgtc
2341 tattcctgtc ctgtgtacaa gactagtcag cggggaccca cctacgtgtg gactttcaac
2401 ctgaagacta aggaaaaccc atccaagtgg gttctggctg gagtagcctt gcttctccag
2461 atttagcatc ctgcagagcc accgagaaaa taaaaaagct gggcttggag gctgcctaga
2521 gggacaggtg gg
//