LOCUS BC128408 1220 bp mRNA linear HUM 05-DEC-2006
DEFINITION Homo sapiens TNFAIP3 interacting protein 3, mRNA (cDNA clone
MGC:156176 IMAGE:40115867), complete cds.
ACCESSION BC128408
VERSION BC128408.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: i Column: 20.
FEATURES Location/Qualifiers
source 1..1220
/db_xref="H-InvDB:HIT000389819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:156176 IMAGE:40115867"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..1220
/gene="TNIP3"
/gene_synonym="FLJ21162"
/gene_synonym="LIND"
/db_xref="GeneID:79931"
/db_xref="HGNC:HGNC:19315"
/db_xref="MIM:608019"
CDS 204..1181
/gene="TNIP3"
/gene_synonym="FLJ21162"
/gene_synonym="LIND"
/codon_start=1
/product="TNFAIP3 interacting protein 3"
/protein_id="AAI28409.1"
/db_xref="GeneID:79931"
/db_xref="HGNC:HGNC:19315"
/db_xref="MIM:608019"
/translation="MAHFVQGTSRMIAAESSTEHKECAEPSTRKNLMNSLEQKIRCLE
KQRKELLEVNQQWDQQFRSMKELYERKVAELKTKLDAAERFLSTREKDPHQRQRKDDR
QREDDRHRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTLANKEKEHYECEIK
RLNKALQDALNIKCSFSEDCLRKSRVEFCHEEMRTEMEVLKQQVQIYEEDFKKERSDR
ERLNQEKEELQQINETSQSQLNRLNSQIKACQMEKEKLEKQLKQMYCPPCNCGLVFHL
QDPWVPTGPGAVQKQREHPPDYQWYALDQLPPDVQHKANGLSSVKKVHP"
BASE COUNT 426 a 235 c 291 g 268 t
ORIGIN
1 cgcggggatt ctgtgtaatt cctatccaca gtcacttctg ttcattttta atgaaaacct
61 attgctgtta ttttctatta tgagttaacg gtgatgtgtg ttttttaaat tttgtatact
121 tgctctcacc ctaaaatata ccttaagaga cttttcccct gtttttcttt ctgctttcca
181 agactccagg aaaaacagct tccatggcac attttgtaca gggcacatct agaatgattg
241 ccgcagaaag ttctacggag cataaagagt gtgctgaacc atcaacaaga aagaacttga
301 tgaattctct tgaacaaaag ataaggtgtt tggaaaaaca aagaaaagag ctcctggaag
361 ttaaccagca atgggatcag caatttagaa gtatgaaaga gttatatgaa agaaaggtag
421 cagagctgaa gacgaaactg gacgccgcgg aaagattcct cagcacgcgg gagaaggatc
481 cgcatcagag gcagagaaag gacgacaggc agagagagga cgacaggcat cgcgacctga
541 cccgggaccg gctgcagcgg gaggagaagg aaaaggaacg cctaaatgaa gaattacatg
601 aattgaaaga agagaataaa cttttaaagg gaaaaaatac tcttgcgaac aaggaaaagg
661 aacattacga atgtgaaata aaacgcctca ataaggctct tcaggatgcc ttgaatatca
721 agtgttcatt ttccgaggac tgtttgagga agtctcgagt ggaattctgc catgaggaga
781 tgagaacaga aatggaagtt ctgaagcagc aggtgcaaat atacgaagaa gacttcaaaa
841 aggaacgatc ggatcgagag agacttaatc aagagaaaga ggagctacag caaattaatg
901 aaacttccca atcccagttg aacaggctga attcccagat aaaagcttgt cagatggaga
961 aagaaaaact agaaaagcaa ttaaaacaga tgtattgccc accctgtaac tgcggcttgg
1021 ttttccacct gcaagatcca tgggtaccaa caggccctgg agctgtgcag aagcaacggg
1081 agcacccacc agactatcag tggtatgctc ttgaccagct tccgccagat gtacaacaca
1141 aggcaaatgg tttatcctca gtaaagaaag tccatccgta gaagtacaca ctaacagaga
1201 gagacaacag gcaacgaggg
//