LOCUS BC128179 2545 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens PAN3 poly(A) specific ribonuclease subunit homolog (S.
cerevisiae), mRNA (cDNA clone MGC:149280 IMAGE:40113220), complete
cds.
ACCESSION BC128179
VERSION BC128179.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2545)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: e Column: 13.
FEATURES Location/Qualifiers
source 1..2545
/db_xref="H-InvDB:HIT000389706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149280 IMAGE:40113220"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGTCCAA sequenced from the reverse primer"
gene 1..2545
/gene="PAN3"
/db_xref="GeneID:255967"
/db_xref="HGNC:HGNC:29991"
CDS 683..2344
/gene="PAN3"
/codon_start=1
/product="PAN3 protein"
/protein_id="AAI28180.1"
/db_xref="GeneID:255967"
/db_xref="HGNC:HGNC:29991"
/translation="MSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPSSASTS
VNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQP
KANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRI
QKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLR
EVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHEGPLPRQHAG
LLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFDVLTFD
NSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLK
NLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLL
AKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKL
DAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL"
BASE COUNT 751 a 557 c 548 g 689 t
ORIGIN
1 atggatggag gtgctttaac tgatacaagt ctcacagatt cctattttag caccagcttt
61 attggagtca atggatttgg aagccctgta gaaacaaaat atcccctgat gcagagaatg
121 actaatagta gcagctcccc aagccttcta aatgacagtg ccaagccata ttcagcccat
181 gatcctctaa catcacctgc ttcatccttg tttaatgact ttggtgccct caacatctct
241 cagagacgaa agccaaggaa gtatcgcctg gggatgctgg aggagaggct agttccgatg
301 ggatcaaagg cacgaaaagc aaagaaccct attggctgcc ttgctgacag gtgtaaatca
361 ggagtaccca tcaatatggt ttggtggaac agagtcacag aaaacaattt acagacacca
421 aatcctactg caagcgagtt tattcctaaa ggaggatcaa cctccaggct gagtaacgtg
481 tcccagtcaa atatgtctgc cttctctcaa gttttctctc acccatccat gggaagccct
541 gctactgctg gattagcgcc agggaacaag ctaccctctg agtcagcact ggacttgaag
601 ataaatccta caattcatga aactgactga ttcgactaaa ggatggatag tttgggcagc
661 gttggacagc tctatgaggg gaatgtcgtt gtctgctggg tcttcccctc ttcattcccc
721 caagattact ccacatactt ctcctgctcc cagaagaaga agtcacactc caaatccagc
781 aagttacatg gtgccttcta gtgcctctac atctgttaat aatcctgttt ctcagactcc
841 gtcttctggt caggtgatcc aaaaggaaac tgttggtggg acgacttact tctatacaga
901 cacaactcca gcacctttga ctggaatggt gtttccaaac tatcatattt atcctccaac
961 tgcacctcac gttgcttata tgcaaccgaa agcaaacgca ccttccttct tcatggctga
1021 tgaactccga caggagctga tcaacagaca tttaataaca atggctcaaa ttgatcaagc
1081 agatatgcca gcagttccta cagaggttga cagctaccat agcctattcc ctctagaacc
1141 actgccacct cccaaccgga tacagaaatc aagtaatttt ggatatatta catcttgcta
1201 caaagctgta aacagcaaag atgatctgcc atattgcctt cggaggatac atggttttcg
1261 tcttgttaac acaaagtgca tggtgttggt cgacatgtgg aagaaaattc aacactcaaa
1321 tatcgtaact ttgcgtgaag tatttaccac taaagcattt gctgagccct ctcttgtgtt
1381 tgcatatgat ttccatgctg gaggagaaac tatgatgagc agacacttta atgaccctaa
1441 tgctgatgcc tacttcacca agagaaagtg gggtcagcac gagggaccat tgcccaggca
1501 gcatgctgga ttattgccag aatctcttat ttgggcatat attgtccaac taagttctgc
1561 attgcgtacc attcatacag caggtttggc atgtcgagtt atggatccaa caaagattct
1621 gataactggc aaaacaaggt tgcgagtaaa ttgtgttgga gtttttgatg ttttaacatt
1681 tgataacagt caaaataata atccattggc attaatggcc cagtaccagc aagcagatct
1741 gatatcatta ggaaaagttg tgttggcttt ggcttgcaac tctttggcag gaattcagcg
1801 agagaattta cagaaagcca tggaactggt gacaatcaac tattcctctg acctgaagaa
1861 tctgattttg tatttgttga ctgaccaaaa caggatgcga agtgtaaatg acatcatgcc
1921 catgattggt gctcgatttt atactcaatt ggatgctgct caaatgagaa atgatgtcat
1981 agaggaagac cttgcaaagg aggttcaaaa tggaagactg tttaggctcc tagcaaaatt
2041 gggaacaatc aatgagaggc cggagtttca gaaggatccc acttggtcag agactggaga
2101 ccgttatctg ttgaaactct ttagggatca tctttttcat caggtgacag aagcaggtgc
2161 tccctggatt gacctcagtc atataatttc ttgtcttaac aagctagatg ctggtgtgcc
2221 agaaaaaata agcctgattt ccagagatga gaagagtgta cttgtggtga cctacagtga
2281 cttaaagcgc tgctttgaaa atacttttca agaactgatt gcagctgcaa atggtcagtt
2341 gtagtatttg ctaaaaaagc acgcaggaca tggctaaaga ccttaaccaa tagcaaattg
2401 cactacagct gaacttttca tcatctcatt cacatttggg aaacgaacag gagatgagca
2461 aagctgcttg cacttcagtc aggtacactg ttacttgaaa ggaagaatgt ttcacttacc
2521 caagagctat ggctgccatt ggaga
//