LOCUS BC128158 1772 bp mRNA linear HUM 01-SEP-2008
DEFINITION Homo sapiens matrix extracellular phosphoglycoprotein, mRNA (cDNA
clone MGC:149249 IMAGE:40112903), complete cds.
ACCESSION BC128158
VERSION BC128158.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: d Column: 12.
FEATURES Location/Qualifiers
source 1..1772
/db_xref="H-InvDB:HIT000389686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149249 IMAGE:40112903"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: TGATCATA sequenced from the reverse primer"
gene 1..1772
/gene="MEPE"
/gene_synonym="OF45"
/db_xref="GeneID:56955"
/db_xref="HGNC:HGNC:13361"
/db_xref="MIM:605912"
CDS 50..1627
/gene="MEPE"
/gene_synonym="OF45"
/codon_start=1
/product="matrix extracellular phosphoglycoprotein"
/protein_id="AAI28159.1"
/db_xref="GeneID:56955"
/db_xref="HGNC:HGNC:13361"
/db_xref="MIM:605912"
/translation="MRVFCVGLLLFSVTWAAPTFQPQTEKTKQSCVEEQRQEEKNKDN
IGFHHLGKRINQELSSKENIVQERKKDLSLSEASENKGSSKSQNYFTNRQRLNKEYSI
SNKENTHNGLRMSIYPKSTGNKGFEDGDDAISKLHDQEEYGAALIRNNMQHIMGPVTA
IKLLGEENKENTPRNVLNIIPASMNYAKAHSKDKKKPQRDSQAQKSPVKSKSTHRIQH
NIDYLKHLSKVKKIPSDFEGSGYTDLQERGDNDISPFSGDGQPFKDIPGKGEATGPDL
EGKDIQTGFAGPSEAESTHLDTKKPGYNEIPEREENGGNTIGTRDETAKEADAVDVSL
VEGSNDIMGSTNFKELPGREGNRVDAGSQNAHQGKVEFHYPPAPSKEKRKEGSSDAAE
STNYNEIPKNGKGSTRKGVDHSNRNQATLNEKQRFPSKGKSQGLPIPSRGLDNEIKNE
MDSFNGPSHENIITHGRKYHYVPHRQNNSTRNKGMPQGKGSWGRQPHSNRRFSSRRRD
DSSESSDSGSSSESDGD"
BASE COUNT 645 a 336 c 424 g 367 t
ORIGIN
1 cggcacgagc aggtattctg aaggtgaaag ataccagaga ttctcaaaga tgcgagtttt
61 ctgtgtggga ctactccttt tcagtgtgac ctgggcagca ccaacatttc aaccacagac
121 tgagaaaact aagcaaagct gtgtggaaga gcagaggcag gaagaaaaaa acaaagacaa
181 tattggtttt caccatttgg gcaagagaat aaatcaagag ctatcatcta aagaaaatat
241 tgtccaggaa agaaagaaag atttgtccct ttctgaagcc agtgagaata agggaagtag
301 taaatctcaa aattatttca caaatagaca gagactgaat aaagaatata gtatcagtaa
361 caaagagaat actcacaatg gcctgaggat gtcaatttat cctaagtcaa ctgggaataa
421 agggtttgag gatggagatg atgctatcag caaactacat gaccaagaag aatatggcgc
481 agctctcatc agaaataaca tgcaacatat aatggggcca gtgactgcaa ttaaactcct
541 gggggaagaa aacaaagaga acacacctag gaatgttcta aacataatcc cagcaagtat
601 gaattatgct aaagcacact cgaaggataa aaagaagcct caaagagatt cccaagccca
661 gaaaagtcca gtaaaaagca aaagcaccca tcgtattcaa cacaacattg actacctaaa
721 acatctctca aaagtcaaaa aaatccccag tgattttgaa ggcagcggtt atacagatct
781 tcaagagaga ggggacaatg atatatctcc tttcagtggg gacggccaac cttttaagga
841 cattcctggt aaaggagaag ctactggtcc tgacctagaa ggcaaagata ttcaaacagg
901 gtttgcaggc ccaagtgaag ctgagagtac tcatcttgac acaaaaaagc caggttataa
961 tgagatccca gagagagaag aaaatggtgg aaataccatt ggaactaggg atgaaactgc
1021 gaaagaggca gatgctgttg atgtcagcct tgtagagggc agcaacgata tcatgggtag
1081 taccaatttt aaggagctcc ctggaagaga aggaaacaga gtggatgctg gcagccaaaa
1141 tgctcaccaa gggaaggttg agtttcatta ccctcctgca ccctcaaaag agaaaagaaa
1201 agaaggcagt agtgatgcag ctgaaagtac caactataat gaaattccta aaaatggcaa
1261 aggcagtacc agaaagggtg tagatcattc taataggaac caagcaacct taaatgaaaa
1321 acaaaggttt cctagtaagg gcaaaagtca gggcctgccc attccttctc gtggtcttga
1381 taatgaaatc aaaaacgaaa tggattcctt taatggcccc agtcatgaga atataataac
1441 acatggcaga aaatatcatt atgtacccca cagacaaaat aattctacac ggaataaggg
1501 tatgccacaa gggaaaggct cctggggtag acaaccccat tccaacagga ggtttagttc
1561 ccgtagaagg gatgacagta gtgagtcatc tgacagtggc agttcaagtg agagcgatgg
1621 tgactagtcc accaggagtt cccagcgggg tgacagtctg aagacctcgt cacctgtgag
1681 ttgatgtaga ggagagccac ctgacagctg accaggtgaa gagaggatag agtgaagaac
1741 tgagtgagcc aagaatcctg gtctccttgg gg
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