LOCUS BC128155 1631 bp mRNA linear HUM 05-DEC-2006
DEFINITION Homo sapiens tRNA isopentenyltransferase 1, mRNA (cDNA clone
MGC:149242 IMAGE:40112695), complete cds.
ACCESSION BC128155
VERSION BC128155.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1631)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1631)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: d Column: 5.
FEATURES Location/Qualifiers
source 1..1631
/db_xref="H-InvDB:HIT000389683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149242 IMAGE:40112695"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CATCACA sequenced from the reverse primer"
gene 1..1631
/gene="TRIT1"
/gene_synonym="FLJ20061"
/gene_synonym="IPT"
/gene_synonym="MOD5"
/db_xref="GeneID:54802"
/db_xref="HGNC:HGNC:20286"
CDS 15..1418
/gene="TRIT1"
/gene_synonym="FLJ20061"
/gene_synonym="IPT"
/gene_synonym="MOD5"
/codon_start=1
/product="tRNA isopentenyltransferase 1"
/protein_id="AAI28156.1"
/db_xref="GeneID:54802"
/db_xref="HGNC:HGNC:20286"
/translation="MASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLG
QRLGGEIVSADSMQVYEGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRA
TALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGL
VLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSELLHRQHTEEGGGPLGGP
LKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQ
HGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFL
SRPGPIVPPVYGLEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNEAENKR
SYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPDHNKEP
KEKGSPGQNDQELKCSV"
BASE COUNT 461 a 365 c 419 g 386 t
ORIGIN
1 cagactgcca taagatggcg tccgtggcgg ctgcacgagc agttcctgtg ggcagtgggc
61 tcaggggcct gcaacggacc ctacctcttg tagtgattct cggggccacg ggcaccggca
121 aatccacgct ggcgttgcag ctaggccagc ggctcggcgg tgagatcgtc agcgctgact
181 ccatgcaggt ctatgaaggc ctagacatca tcaccaacaa ggtttctgcc caagagcaga
241 gaatctgccg gcaccacatg atcagctttg tggatcctct tgtgaccaat tacacagtgg
301 tggacttcag aaatagagca actgctctga ttgaagatat atttgcccga gacaaaattc
361 ctattgttgt gggaggaacc aattattaca ttgaatctct gctctggaaa gttcttgtca
421 ataccaagcc ccaggagatg ggcactgaga aagtgattga ccgaaaagtg gagcttgaaa
481 aggaggatgg tcttgtactt cacaaacgcc taagccaggt ggacccagaa atggctgcca
541 agctgcatcc acatgacaaa cgcaaagtgg ccaggagctt gcaagttttt gaagaaacag
601 gaatctctca tagtgaatta ctccatcgtc aacatacgga agaaggtggt ggtccccttg
661 gaggtcctct gaagttctct aacccttgca tcctttggct tcatgctgac caggcagttc
721 tagatgagcg cttggataag agggtggatg acatgcttgc tgctgggctc ttggaggaac
781 taagagattt tcacagacgc tataatcaga agaatgtttc ggaaaatagc caggactatc
841 aacatggtat cttccaatca attggcttca aggaatttca cgagtacctg atcactgagg
901 gaaaatgcac actggagact agtaaccagc ttctaaagaa aggtattgag gctctgaaac
961 aagtaactaa gagatatgcc cggaaacaaa accgatgggt taaaaaccgt tttttgagca
1021 gacctggtcc cattgtcccc cctgtctatg gcttagaggt atctgatgtc tcgaagtggg
1081 aagagtctgt tcttgaacct gctcttgaaa tcgtgcaaag tttcatccag ggccacaagc
1141 ctacagccac tccaataaag atgccataca atgaagctga gaacaagaga agttatcacc
1201 tgtgtgacct ctgtgatcga atcatcattg gggatcgcga atgggcagcg cacataaaat
1261 ccaaatccca cttgaaccaa ctgaagaaaa gaagaagatt ggactcagat gctgtcaaca
1321 ccatagaaag tcagagtgtt tccccagacc ataacaaaga acctaaagag aagggatccc
1381 cagggcagaa tgatcaagag ctgaaatgca gcgtttaaga gacatgtcca gtggcctttg
1441 gaaaggtggt ggggatccag ttcaggaggg aggggtatgt ttgtctccca gtctgggcaa
1501 aggagtgcta tgcggaattc tctgcatagc agaaaagctc ccaccatttt cttttgatgt
1561 ggttttaaag tctcacgttc tctataatag aaacagcagg tcttgtcagc tccttgtgtg
1621 gctgatgtgt t
//