LOCUS       BC128153                1597 bp    mRNA    linear   HUM 30-AUG-2007
DEFINITION  Homo sapiens visual system homeobox 2, mRNA (cDNA clone MGC:149240
            IMAGE:40112640), complete cds.
ACCESSION   BC128153
VERSION     BC128153.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1597)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 30 Row: d Column: 9.
FEATURES             Location/Qualifiers
     source          1..1597
                     /db_xref="H-InvDB:HIT000389681"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:149240 IMAGE:40112640"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_282"
                     /note="Vector: pCR-Blunt II-TOPO; Clone identification
                     sequence tag: TGAATTAC sequenced from the reverse primer"
     gene            1..1597
                     /gene="VSX2"
                     /gene_synonym="MCOP2"
                     /gene_synonym="MCOPCB3"
                     /gene_synonym="RET1"
                     /db_xref="GeneID:338917"
                     /db_xref="HGNC:HGNC:1975"
                     /db_xref="MIM:142993"
     CDS             47..1132
                     /gene="VSX2"
                     /gene_synonym="MCOP2"
                     /gene_synonym="MCOPCB3"
                     /gene_synonym="RET1"
                     /codon_start=1
                     /product="visual system homeobox 2"
                     /protein_id="AAI28154.1"
                     /db_xref="GeneID:338917"
                     /db_xref="HGNC:HGNC:1975"
                     /db_xref="MIM:142993"
                     /translation="MTGKAGEALSKPKSETVAKSTSGGAPARCTGFGIQEILGLNKEP
                     PSSHPRAALDGLAPGHLLAARSVLSPAGVGGMGLLGPGGLPGFYTQPTFLEVLSDPQS
                     VHLQPLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQL
                     EELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAE
                     YGLYGAMVRHSIPLPESILKSAKDGIMDSCAPWLLGMHKKSLEAAAESGRKPEGERQA
                     LPKLDKMEQDERGPDAQAAISQEELRENSIAVLRAKAQEHSTKVLGTVSGPDSLARST
                     EKPEEEEAMDEDRPAERLSPPQLEDMA"
BASE COUNT          335 a          503 c          492 g          267 t
ORIGIN      
        1 ggggagctaa agacctgcgg cctcagcccc tccaaagaac agggagatga cggggaaagc
       61 aggggaagcg ctgagcaagc ccaaatccga gacagtggcc aagagtacct cggggggcgc
      121 cccggccagg tgcactgggt tcggcatcca ggagatcctg ggcttgaaca aggagccccc
      181 gagctcccac ccgcgggcag cgctcgacgg cctggccccc gggcacttgc tggcggcgcg
      241 ctcagtgctc agccccgcgg gggtgggcgg catggggctt ctggggcccg gggggctccc
      301 tggcttctac acgcagccca ccttcctgga agtgctgtcc gacccgcaga gcgtccactt
      361 gcagccattg ggcagagcat cggggccgct ggacaccagc cagacggcca gctcggattc
      421 tgaagatgtt tcctccagcg atcgaaaaat gtccaaatct gctttaaacc agaccaagaa
      481 acggaagaag cggcgacaca ggacaatctt tacctcttac cagctagagg agctggagaa
      541 ggcattcaac gaagcccact acccagacgt ctatgcccgg gagatgctgg ccatgaaaac
      601 ggagctgccg gaagacagga tacaggtctg gttccagaac cgtcgagcca agtggaggaa
      661 gcgggagaag tgctggggcc ggagcagtgt catggcggag tatgggctct acggggccat
      721 ggtgcggcac tccatccccc tgcccgagtc catcctcaag tcagccaagg atggcatcat
      781 ggactcctgt gccccgtggc tactggggat gcacaaaaag tcgctggagg cagcagccga
      841 gtcggggagg aagcccgagg gggaacgcca ggccctgccc aagctcgaca agatggagca
      901 ggacgagcgg ggccccgacg ctcaggcggc catctcccag gaggaactga gggagaacag
      961 cattgcggtg ctccgggcca aagctcagga gcacagcacc aaagtgctgg ggactgtgtc
     1021 tgggccggac agcctggccc ggagtaccga gaagccagag gaggaggagg ccatggatga
     1081 agacaggccg gcggagaggc tcagtccacc gcagctggag gacatggctt aggtcaaggc
     1141 gcgctcagat gccggagccc caagactctg ctctcctcgg gccctgtggt gctgggagat
     1201 gctctctgag gcaaggccca gacctggcct ctgccatcct ccctgttccc cacaggtcct
     1261 ccatcacccc tggtggctgc aggcaccgct gggttctgac tctggaccat gctgagacat
     1321 ccctcatcta gtcttgacct ctccagcatc ccagcctcag aagccttctt gctgcccaca
     1381 acgtcccctc aagccccttc tctcaatccc tttgcaacgc tcactggttt tggccacccc
     1441 ttgctctctg ttctcttgct ttaaagagtc ctccttccca gctctacatt ctgctctgcc
     1501 catgcctaaa gcccattgct gcaaatgcat tgtgaattgc ctgccatggc tgtgacacag
     1561 acggaggact ggaactgcaa ctccagcgtc ctcagca
//