LOCUS BC127947 973 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens growth differentiation factor 6, mRNA (cDNA clone
MGC:158100 IMAGE:40132943), complete cds.
ACCESSION BC127947
VERSION BC127947.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 32 Row: l Column: 23.
FEATURES Location/Qualifiers
source 1..973
/db_xref="H-InvDB:HIT000389563"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:158100 IMAGE:40132943"
/tissue_type="PCR rescued clones, C list"
/clone_lib="NIH_MGC_398"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTATTCAC sequenced from
the reverse primer"
gene 1..973
/gene="GDF6"
/gene_synonym="BMP13"
/gene_synonym="CDMP2"
/gene_synonym="KFS"
/gene_synonym="KFSL"
/gene_synonym="SGM1"
/db_xref="GeneID:392255"
/db_xref="HGNC:HGNC:4221"
/db_xref="MIM:601147"
CDS 28..843
/gene="GDF6"
/gene_synonym="BMP13"
/gene_synonym="CDMP2"
/gene_synonym="KFS"
/gene_synonym="KFSL"
/gene_synonym="SGM1"
/codon_start=1
/product="GDF6 protein"
/protein_id="AAI27948.1"
/db_xref="GeneID:392255"
/db_xref="HGNC:HGNC:4221"
/db_xref="MIM:601147"
/translation="MDTPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMR
SRKEGKMQRAPRDSDAGREGQEPQPRPQDEPRAQQPRAQEPPGRGPRVVPHEYMLSIY
RTYSIAEKLGINASFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSMLSDKEE
LVGAELRLFRQAPSAPWGPPAGPLHVQLFPCLSPLLLDARTLDPQGAPPAGWEVFDVW
QGLRHQPWKQLCLELRAAPGPAESGLRPEGAASPGAGPAGGIHQIPAAACPPN"
BASE COUNT 164 a 321 c 309 g 179 t
ORIGIN
1 ctggggagac gcagccactt gcccgccatg gatactccca gggtcctgct ctcggccgtc
61 ttcctcatca gttttctgtg ggatttgccc ggtttccagc aggcttccat ctcatcctcc
121 tcgtcgtccg ccgagctggg ttccaccaag ggcatgcgaa gccgcaagga aggcaagatg
181 cagcgggcgc cgcgcgacag tgacgcgggc cgggagggcc aggaaccaca gccgcggcct
241 caggacgaac cccgggctca gcagccccgg gcgcaggagc cgccaggcag gggtccgcgc
301 gtggtgcccc acgagtacat gctgtcaatc tacaggactt actccatcgc tgagaagctg
361 ggcatcaatg ccagcttttt ccagtcttcc aagtcggcta atacgatcac cagctttgta
421 gacaggggac tagacgatct ctcgcacact cctctccgga gacagaagta tttgtttgat
481 gtgtccatgc tctcagacaa agaagagctg gtgggcgcgg agctgcggct ctttcgccag
541 gcgccctcag cgccctgggg gccaccagcc gggccgctcc acgtgcagct cttcccttgc
601 ctttcgcccc tactgctgga cgcgcggacc ctggacccgc agggggcgcc gccggccggc
661 tgggaagtct tcgacgtgtg gcagggcctg cgccaccagc cctggaagca gctgtgcttg
721 gagctgcggg ccgcccccgg acctgcggag tctgggcttc ggccggaggg tgcggcctcc
781 ccaggagcgg gccctgctgg tggtattcac cagatcccag ctgctgcgtg cccaccaaat
841 tgactcccat cagcattcta tacatcgacg cgggcaataa tgtggtctac aagcagtacg
901 aggacatggt ggtggagtcg tgcggctgca ggtagcggtg cctttcccgc cgccttggcc
961 cggaaccaag gtg
//