LOCUS BC127709 546 bp mRNA linear HUM 23-JUL-2007 DEFINITION Homo sapiens low density lipoprotein receptor class A domain containing 1, mRNA (cDNA clone MGC:157804 IMAGE:40127477), complete cds. ACCESSION BC127709 VERSION BC127709.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 546) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 546) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-NOV-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 32 Row: d Column: 6. FEATURES Location/Qualifiers source 1..546 /db_xref="H-InvDB:HIT000389337" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:157804 IMAGE:40127477" /tissue_type="PCR rescued clones, C list" /clone_lib="NIH_MGC_398" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: CGTAATTA sequenced from the reverse primer" gene 1..546 /gene="LDLRAD1" /db_xref="GeneID:388633" /db_xref="HGNC:HGNC:32069" CDS 8..508 /gene="LDLRAD1" /codon_start=1 /product="LDLRAD1 protein" /protein_id="AAI27710.1" /db_xref="GeneID:388633" /db_xref="HGNC:HGNC:32069" /translation="MQGTRAELSAHSPSRAAGNRRHEQGLPPGAQACITLTNRTGFLC HDQRSCIPASGVCDGVRTCTHGEDEDESLCRDVPQSLPHFLVAHCGDPASWIYSDQKC DGTNNCGDCSDELSPVTVCPPCGPGWWRCPSTFFKYCDCIPRHLCRDHVQHCSDWSDE YACPGP" BASE COUNT 119 a 165 c 156 g 106 t ORIGIN 1 ggtgacaatg cagggaaccc gtgctgagct ctctgcacac agccccagtc gggcagcagg 61 aaaccgaaga catgaacaag gtcttccccc aggagcccaa gcttgtataa cactgacaaa 121 caggacaggc ttcttgtgcc atgaccagag gagctgcatt ccagccagtg gggtctgtga 181 tggcgttcgc acctgtaccc acggcgagga cgaggatgag agcttgtgcc gagatgtgcc 241 ccagagcctc ccccacttcc ttgtggccca ctgtggagac ccggcctcct ggatctactc 301 agaccaaaaa tgtgatggca ctaacaactg cggggactgt tcagatgaac tgagcccagt 361 aactgtgtgc ccaccctgcg gccctgggtg gtggcgctgt ccttcaacct tcttcaagta 421 ctgcgactgt ataccgaggc atctctgccg cgaccatgta cagcactgct ccgactggtc 481 cgatgagtat gcctgtcccg gaccctgagt gggccactca ggccagcatg gaaggctggc 541 tggaat //