LOCUS BC127708 727 bp mRNA linear HUM 22-NOV-2006 DEFINITION Homo sapiens low density lipoprotein receptor class A domain containing 1, mRNA (cDNA clone MGC:157803 IMAGE:40127476), complete cds. ACCESSION BC127708 VERSION BC127708.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 727) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 727) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-NOV-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 32 Row: d Column: 5. FEATURES Location/Qualifiers source 1..727 /db_xref="H-InvDB:HIT000389336" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:157803 IMAGE:40127476" /tissue_type="PCR rescued clones, C list" /clone_lib="NIH_MGC_398" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: AGTTCTATC sequenced from the reverse primer" gene 1..727 /gene="LDLRAD1" /db_xref="GeneID:388633" /db_xref="HGNC:HGNC:32069" CDS 72..689 /gene="LDLRAD1" /codon_start=1 /product="low density lipoprotein receptor class A domain containing 1" /protein_id="AAI27709.1" /db_xref="GeneID:388633" /db_xref="HGNC:HGNC:32069" /translation="MNKVFPQGENGYTAAESKAHPGGEAGGGHLCCSRRGACLSASLL LLLATVAALIALVTILGLPSCTPGAQACITLTNRTGFLCHDQRSCIPASGVCDGVRTC THGEDEDESLCRDVPQSLPHFLVAHCGDPASWIYSDQKCDGTNNCGDCSDELSPVTVC PPCGPGWWRCPSTFFKYCDCIPRHLCRDHVQHCSDWSDEYACPGP" BASE COUNT 147 a 232 c 205 g 143 t ORIGIN 1 ggtgacaatg cagggaaccc gtgctgagct ctctgcacac agccccagtc gggcagcagg 61 aaaccgaaga catgaacaag gtcttccccc agggagagaa tggctacact gctgctgaat 121 ccaaagccca ccctggaggg gaagcaggcg gcggccacct ctgctgctca cgtcgcgggg 181 cctgcctctc tgcctctctg ctgctcctcc tggcaactgt ggcggccctc atcgccttgg 241 tcaccattct tggactccca tcatgcaccc caggagccca agcttgtata acactgacaa 301 acaggacagg cttcttgtgc catgaccaga ggagctgcat tccagccagt ggggtctgtg 361 atggcgttcg cacctgtacc cacggcgagg acgaggatga gagcttgtgc cgagatgtgc 421 cccagagcct cccccacttc cttgtggccc actgtggaga cccggcctcc tggatctact 481 cagaccaaaa atgtgatggc actaacaact gcggggactg ttcagatgaa ctgagcccag 541 taactgtgtg cccaccctgc ggccctgggt ggtggcgctg tccttcaacc ttcttcaagt 601 actgcgactg tataccgagg catctctgcc gcgaccatgt acagcactgc tccgactggt 661 ccgatgagta tgcctgtccc ggaccctgag tgggccactc aggccagcat ggaaggctgg 721 ctggaat //